RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 YIPF3Q9GZM5 350 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-215ENST00000566843 UBN1Q9NPG3 1134 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
COMMD4-215ENST00000566843 DCTN3O75935 186 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 GM2AP17900 193 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 SNX1Q13596 522 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 TNIP1Q15025 636 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 C1orf220Q5T0J3 134 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 SLFN13Q68D06 897 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 SEPT14Q6ZU15 432 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 LMNTD2Q8IXW0 634 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
COMMD4-215ENST00000566843 ZMYND8Q9ULU4 1186 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-215ENST00000566843 RBBP6Q7Z6E9 1792 aaKnown RBP16.7■□□□□ 0.26
COMMD4-215ENST00000566843 DPPA5A6NC42 116 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 GAS8O95995 478 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 MMP10P09238 476 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 ACADSP16219 412 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 VAMP7P51809 220 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 NR1H3Q13133 447 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 PPP2R5CQ13362 524 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 FAM47EQ6ZV65 393 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 BBOF1Q8ND07 529 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-215ENST00000566843 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 KAT5Q92993 513 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 LRRC37BQ96QE4 947 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 TLE6Q9H808 572 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
COMMD4-215ENST00000566843 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 TBK1Q9UHD2 729 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 PHTF1Q9UMS5 762 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 ENO4A6NNW6 628 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-215ENST00000566843 ZBTB39O15060 712 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 PRPF4O43172 522 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■■■■ 39.9
COMMD4-215ENST00000566843 PSMD10O75832 226 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 NPTXRO95502 500 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 RASA3Q14644 834 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 ODR4Q5SWX8 454 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 FBXO11Q86XK2 927 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 SLC17A8Q8NDX2 589 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 TBC1D10AQ9BXI6 508 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 KIAA1683Q9H0B3 1180 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 HAO1Q9UJM8 370 aa16.7■□□□□ 0.26
COMMD4-215ENST00000566843 QSER1Q2KHR3 1735 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 ZNF536O15090 1300 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 RASA4BC9J798 803 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 RASA4O43374 803 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 TARSP26639 723 aaKnown RBP16.69■□□□□ 0.26
COMMD4-215ENST00000566843 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-215ENST00000566843 MCCD1P59942 119 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-215ENST00000566843 CENPCQ03188 943 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 TRABD2AQ86V40 505 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 LONP2Q86WA8 852 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 KREMEN1Q96MU8 473 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 FOXP3Q9BZS1 431 aa16.69■□□□□ 0.26
COMMD4-215ENST00000566843 EDF1O60869 148 aaKnown RBP16.68■□□□□ 0.26
COMMD4-215ENST00000566843 ZNF76P36508 570 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 ADCY8P40145 1251 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 RASSF2P50749 326 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 TDRPQ86YL5 185 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 C10orf82Q8WW14 230 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 ATG4AQ8WYN0 398 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 SHC3Q92529 594 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 PWWP2AQ96N64 755 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 NACC1Q96RE7 527 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 HERPUD2Q9BSE4 406 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 SUGT1Q9Y2Z0 365 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 MYH11P35749 1972 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 CYP26A1O43174 497 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 LMNAP02545 664 aaKnown RBP16.68■□□□□ 0.26
COMMD4-215ENST00000566843 NEFHP12036 1026 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
COMMD4-215ENST00000566843 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 GCLMP48507 274 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 TRIP13Q15645 432 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-215ENST00000566843 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.68■□□□□ 0.26
COMMD4-215ENST00000566843 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 SLC5A5Q92911 643 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
COMMD4-215ENST00000566843 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 HLA-DOAP06340 250 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 GCAP28676 217 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 PCK1P35558 622 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 PRELPP51888 382 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 CDR2Q01850 454 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 DNAJC3Q13217 504 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms