RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 MFAP3P55082 362 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 ENPEPQ07075 957 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 GNASQ5JWF2 1037 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 TSGA10Q9BZW7 698 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 GOLPH3Q9H4A6 298 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
LINC00562-201ENST00000566385 NUB1Q9Y5A7 615 aa12.23□□□□□ -0.45
LINC00562-201ENST00000566385 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 ZEB2O60315 1214 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 DUSP11O75319 330 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 CHRNB2P17787 502 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 CCND3P30281 292 aaPredicted RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 TFAMQ00059 246 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 SP3Q02447 781 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 TRAPPC11Q7Z392 1133 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 PCDHB18PQ96TA0 734 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 Q9Y3F1 56 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 TRIP11Q15643 1979 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 MMEP08473 750 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 HOXA11P31270 313 aaPredicted RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 NCBP1Q09161 790 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 NCOA4Q13772 614 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 ERCC6LQ2NKX8 1250 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 RPUSD2Q8IZ73 545 aaKnown RBP12.22□□□□□ -0.45
LINC00562-201ENST00000566385 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
LINC00562-201ENST00000566385 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 ZNF185O15231 689 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 NCK2O43639 380 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 PHACTR2O75167 634 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 ABCB4P21439 1286 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 TNFAIP3P21580 790 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 GALCP54803 685 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 GCNT1Q02742 428 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 PTPROQ16827 1216 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 WDR49Q8IV35 697 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 PSMB7Q99436 277 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.45
LINC00562-201ENST00000566385 PUF60Q9UHX1 559 aaKnown RBP12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CDC23Q9UJX2 597 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 SMIM35A0A1B0GVV1 85 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 LACTBL1A8MY62 500 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 ERLIN2O94905 339 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CLSTN1O94985 981 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 NFICP08651 508 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 KRT5P13647 590 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CYP11B1P15538 503 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 MYL6P60660 151 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 NOP14P78316 857 aaKnown RBP12.21□□□□□ -0.45
LINC00562-201ENST00000566385 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 WDR44Q5JSH3 913 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 VPS36Q86VN1 386 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 TRIM58Q8NG06 486 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CD99L2Q8TCZ2 262 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 PACSIN2Q9UNF0 486 aaPredicted RBP12.21□□□□□ -0.45
LINC00562-201ENST00000566385 DAAM1Q9Y4D1 1078 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 HES2Q9Y543 173 aa12.21□□□□□ -0.45
LINC00562-201ENST00000566385 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
LINC00562-201ENST00000566385 TACC1O75410 805 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 PALMO75781 387 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ACO1P21399 889 aaKnown RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 CXCR5P32302 372 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 GJA9P57773 515 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 RBM10P98175 930 aaKnown RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ZNF410Q86VK4 478 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 DDX1Q92499 740 aaKnown RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ERO1AQ96HE7 468 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 SEPT4O43236 478 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 FTCDO95954 541 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 CFHP08603 1231 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 H2AFZP0C0S5 128 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 CCDC172P0C7W6 258 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 FMO1Q01740 532 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 CUL2Q13617 745 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ELF2Q15723 593 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 DUOXA2Q1HG44 320 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
LINC00562-201ENST00000566385 JADE1Q6IE81 842 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 H2AFVQ71UI9 128 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 WNT8BQ93098 351 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 ARHGEF26Q96DR7 871 aa12.2□□□□□ -0.46
LINC00562-201ENST00000566385 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms