RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SNX27Q96L92 541 aa22.09■■□□□ 1.13
CLN6-207ENST00000566347 SMOC2Q9H3U7 446 aa22.09■■□□□ 1.13
CLN6-207ENST00000566347 KCNK12Q9HB15 430 aa22.09■■□□□ 1.13
CLN6-207ENST00000566347 EPS15L1Q9UBC2 864 aa22.09■■□□□ 1.13
CLN6-207ENST00000566347 ABLIM1O14639 778 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 PDGFBP01127 241 aaPredicted RBP22.08■■□□□ 1.13
CLN6-207ENST00000566347 HNRNPA1P09651 372 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLN6-207ENST00000566347 MAPTP10636 758 aaKnown RBP22.08■■□□□ 1.13
CLN6-207ENST00000566347 KCNE1P15382 129 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 PDCP20941 246 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 NUBP1P53384 320 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 VCPP55072 806 aaKnown RBP22.08■■□□□ 1.13
CLN6-207ENST00000566347 CUL4AQ13619 759 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 NOLC1Q14978 699 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLN6-207ENST00000566347 ZPBP2Q6X784 338 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 PRSS33Q8NF86 280 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 GOLGA2P5Q9HBQ8 144 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.08■■□□□ 1.132e-9■■■■■ 36.3
CLN6-207ENST00000566347 CNTN3Q9P232 1028 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 ODF2LQ9ULJ1 636 aa22.08■■□□□ 1.13
CLN6-207ENST00000566347 N4BP1O75113 896 aaKnown RBP22.07■■□□□ 1.12
CLN6-207ENST00000566347 SCP2P22307 547 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 HOXA9P31269 272 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 LONP1P36776 959 aaKnown RBP22.07■■□□□ 1.12
CLN6-207ENST00000566347 NXPE3Q969Y0 559 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 ANKFY1Q9P2R3 1169 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 MTRRQ9UBK8 725 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 DUSP12Q9UNI6 340 aa22.07■■□□□ 1.12
CLN6-207ENST00000566347 HARSP12081 509 aaKnown RBP22.06■■□□□ 1.12
CLN6-207ENST00000566347 RPL9P32969 192 aaKnown RBP22.06■■□□□ 1.12
CLN6-207ENST00000566347 NCKAP1LP55160 1127 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 SOX4Q06945 474 aaPredicted RBP22.06■■□□□ 1.12
CLN6-207ENST00000566347 RAB33AQ14088 237 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 ARSHQ5FYA8 562 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 PPM1LQ5SGD2 360 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 CD300LGQ6UXG3 332 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 ANKS3Q6ZW76 656 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 RASSF8Q8NHQ8 419 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 KCNN1Q92952 543 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 ZBTB45Q96K62 511 aaPredicted RBP22.06■■□□□ 1.12
CLN6-207ENST00000566347 MFSD1Q9H3U5 465 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 BACE2Q9Y5Z0 518 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 DOCK8Q8NF50 2099 aa22.06■■□□□ 1.12
CLN6-207ENST00000566347 NPHP3-ACAD11A0A0J9YXS1 232 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 VPS37CA5D8V6 355 aaPredicted RBP22.05■■□□□ 1.12
CLN6-207ENST00000566347 PODXLO00592 558 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 CLDN3O15551 220 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 ADAM12O43184 909 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 C8AP07357 584 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 OR1D2P34982 312 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 MCL1Q07820 350 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 SF3A1Q15459 793 aaKnown RBP22.05■■□□□ 1.12
CLN6-207ENST00000566347 UVSSAQ2YD98 709 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 RTL10Q7L3V2 364 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 ALYREFQ86V81 257 aaKnown RBP22.05■■□□□ 1.12
CLN6-207ENST00000566347 GPBP1Q86WP2 473 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 C3orf58Q8NDZ4 430 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 ZMAT2Q96NC0 199 aaKnown RBP22.05■■□□□ 1.12
CLN6-207ENST00000566347 MYADMQ96S97 322 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 IRF2BPLQ9H1B7 796 aa22.05■■□□□ 1.12
CLN6-207ENST00000566347 ZFP37Q9Y6Q3 630 aaPredicted RBP22.05■■□□□ 1.12
CLN6-207ENST00000566347 XYLBO75191 536 aa22.04■■□□□ 1.12
CLN6-207ENST00000566347 IGFBP6P24592 240 aaPredicted RBP22.04■■□□□ 1.12
CLN6-207ENST00000566347 TKTP29401 623 aaKnown RBP22.04■■□□□ 1.12
CLN6-207ENST00000566347 CACNB1Q02641 598 aaPredicted RBP22.04■■□□□ 1.12
CLN6-207ENST00000566347 TCF15Q12870 199 aa22.04■■□□□ 1.12
CLN6-207ENST00000566347 GET4Q7L5D6 327 aaPredicted RBP22.04■■□□□ 1.12
CLN6-207ENST00000566347 BICD1Q96G01 975 aa22.04■■□□□ 1.12
CLN6-207ENST00000566347 REEP2Q9BRK0 252 aa22.04■■□□□ 1.12
CLN6-207ENST00000566347 CDY1Q9Y6F8 540 aa22.04■■□□□ 1.12
CLN6-207ENST00000566347 POU2F2P09086 479 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 LAMP2P13473 410 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 PLCG1P19174 1290 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 FSHRP23945 695 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 MATR3P43243 847 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLN6-207ENST00000566347 BRCC3P46736 316 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 AXDND1Q5T1B0 1012 aaPredicted RBP22.03■■□□□ 1.12
CLN6-207ENST00000566347 ASTLQ6HA08 431 aaPredicted RBP22.03■■□□□ 1.12
CLN6-207ENST00000566347 HAUS6Q7Z4H7 955 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 SLC7A14Q8TBB6 771 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 PLEKHA5Q9HAU0 1116 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 PARVGQ9HBI0 331 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 BLOC1S4Q9NUP1 217 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 FBXL21Q9UKT6 434 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 NUB1Q9Y5A7 615 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.03■■□□□ 1.12
CLN6-207ENST00000566347 CACNA1HO95180 2353 aa22.03■■□□□ 1.12
CLN6-207ENST00000566347 PDCD11Q14690 1871 aaKnown RBP22.03■■□□□ 1.12
CLN6-207ENST00000566347 I3L4J1 428 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 SYN3O14994 580 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 FAM13AO94988 1023 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.12
CLN6-207ENST00000566347 ABCD1P33897 745 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 MRE11P49959 708 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 CLCN5P51795 746 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 ZNF131P52739 623 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 DHX8Q14562 1220 aaKnown RBP22.02■■□□□ 1.12
CLN6-207ENST00000566347 KARSQ15046 597 aaKnown RBP22.02■■□□□ 1.12
CLN6-207ENST00000566347 KYAT1Q16773 422 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 SLC10A6Q3KNW5 377 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms