RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 KIF20BQ96Q89 1820 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 A0A1W2PP64 1363 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 PTGES3LE9PB15 166 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GOLGA6L19H0YKK7 550 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 H7C0S8 307 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ZBTB14O43829 449 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NOL3O60936 208 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 CFBP00751 764 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NPR3P17342 541 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 HLA-DPA1P20036 260 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 PIK3CBP42338 1070 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CCR9P51686 369 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CASP5P51878 434 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 COPS2P61201 443 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NFIAQ12857 509 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CBX3Q13185 183 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 VEPH1Q14D04 833 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 HSP90AA4PQ58FG1 418 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CCDC122Q5T0U0 273 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 SPRYD7Q5W111 196 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LMBR1LQ6UX01 489 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LUZP1Q86V48 1076 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LSRQ86X29 649 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 FAM43AQ8N2R8 423 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CTCFLQ8NI51 663 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 C7orf43Q8WVR3 580 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 DDX1Q92499 740 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 MAML1Q92585 1016 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CENPIQ92674 756 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 ATP2A3Q93084 1043 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NIFKQ9BYG3 293 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 TXLNGYQ9BZA5 131 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 MTMR12Q9C0I1 747 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GJB4Q9NTQ9 266 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 KIF17Q9P2E2 1029 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 DENND2AQ9ULE3 1009 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 STK38LQ9Y2H1 464 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 PCDHGA1Q9Y5H4 931 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 BLACEA4D250 179 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 FSCN2O14926 492 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 NVLO15381 856 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 LILRA1O75019 489 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 PGM3O95394 542 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 DDX58O95786 925 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 SMTNP53814 917 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 KIF23Q02241 960 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 RCN2Q14257 317 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GRIN2CQ14957 1233 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 RCN1Q15293 331 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 HSF5Q4G112 596 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 USP39Q53GS9 565 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 STYK1Q6J9G0 422 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 CYP4F22Q6NT55 531 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 TMEM154Q6P9G4 183 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 PLEKHM3Q6ZWE6 761 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 LRRC71Q8N4P6 559 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GDAP1Q8TB36 358 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 CUL5Q93034 780 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 SLC4A9Q96Q91 983 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 NAP1L3Q99457 506 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 BRD8Q9H0E9 1235 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 RPRD1BQ9NQG5 326 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 KCNQ5Q9NR82 932 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 TOMM22Q9NS69 142 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 KCND1Q9NSA2 647 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD9-216ENST00000565803 KLHL3Q9UH77 587 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 HACL1Q9UJ83 578 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD9-216ENST00000565803 A0A0G2JPF8 293 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 B4E171 279 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 HNRNPCL3B7ZW38 293 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GIPC1O14908 333 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 AREL1O15033 823 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 CETN3O15182 167 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 DAPK3O43293 454 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 CNOT4O95628 575 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 AFPP02771 609 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 SNRPA1P09661 255 aaKnown RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 HNRNPCL4P0DMR1 293 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 PCNAP12004 261 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 ALOX15P16050 662 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 ALOX12P18054 663 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 SFPQP23246 707 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD9-216ENST00000565803 NUP62P37198 522 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 ADH7P40394 386 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 TM4SF4P48230 202 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GIPRP48546 466 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GDF10P55107 478 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 CASP6P55212 293 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 GMFBP60983 142 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 FKBP1BP68106 108 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 HNRNPUQ00839 825 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD9-216ENST00000565803 NRG1Q02297 640 aaPredicted RBP3.31□□□□□ -1.88
CHD9-216ENST00000565803 GALEQ14376 348 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 LETM2Q2VYF4 491 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 ARHGAP11AQ6P4F7 1023 aa3.31□□□□□ -1.88
CHD9-216ENST00000565803 C11orf88Q6PI97 169 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms