RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CA8P35219 290 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 KRT2P35908 639 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 PBX3P40426 434 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 CEBPZQ03701 1054 aaKnown RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 GRIN1Q05586 938 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 HSDL1Q3SXM5 330 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 N4BP2L1Q5TBK1 243 aaPredicted RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 ARHGEF16Q5VV41 709 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 TSSK4Q6SA08 328 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 LINC01599Q8WXQ3 324 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 HAS1Q92839 578 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 P2RX5Q93086 422 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 LENG9Q96B70 501 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 RTP3Q9BQQ7 232 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 SEMA4AQ9H3S1 761 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 JPH1Q9HDC5 661 aaPredicted RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 NAGPAQ9UK23 515 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 TICRRQ7Z2Z1 1910 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 ADAMTS20P59510 1910 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 MYH9P35579 1960 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 IGLV3-22A0A075B6J6 115 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 H3BQV1 296 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 MEIS1O00470 390 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 DHX15O43143 795 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 F13A1P00488 732 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 SMIM10L2AP0DMW4 78 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 SMIM10L2BP0DMW5 78 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 GLULP15104 373 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 TGM1P22735 817 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 EDNRBP24530 442 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 SREBF1P36956 1147 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 DMWDQ09019 674 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 KCNC3Q14003 757 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 LPIN1Q14693 890 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 NOSTRINQ8IVI9 506 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 MAML2Q8IZL2 1156 aaPredicted RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 REXO1Q8N1G1 1221 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 WASF1Q92558 559 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 RTKNQ9BST9 563 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 C16orf70Q9BSU1 422 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 FOXQ1Q9C009 403 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 FOXP1Q9H334 677 aaPredicted RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 AGO3Q9H9G7 860 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
UBFD1-204ENST00000565634 RWDD3Q9Y3V2 267 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 UBIAD1Q9Y5Z9 338 aa6.9□□□□□ -1.3
UBFD1-204ENST00000565634 ASPMQ8IZT6 3477 aa6.9□□□□□ -1.31
UBFD1-204ENST00000565634 BPTFQ12830 3046 aa6.9□□□□□ -1.31
UBFD1-204ENST00000565634 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 hCG_1984214I3L0E3 225 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 MSH4O15457 936 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 KINO60870 393 aaKnown RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 FGF18O76093 207 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 F2P00734 622 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 CYP3A4P08684 503 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 SPINK2P20155 84 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 GNA11P29992 359 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 CDC25AP30304 524 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 CD52P31358 61 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 MCM7P33993 719 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 RAD51AP2Q09MP3 1159 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 TMEM62Q0P6H9 643 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 ITGB3BPQ13352 177 aaPredicted RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 TRIM29Q14134 588 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 NONOQ15233 471 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 PTPAQ15257 358 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 LETM2Q2VYF4 491 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 PRR16Q569H4 304 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 ARTNQ5T4W7 220 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 FAM102BQ5T8I3 360 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 UTP14CQ5TAP6 766 aaKnown RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 TMC5Q6UXY8 1006 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 USP49Q70CQ1 688 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 THNSL1Q8IYQ7 743 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 ZNF713Q8N859 430 aaPredicted RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 TDRD5Q8NAT2 981 aaKnown RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 NSUN6Q8TEA1 469 aaKnown RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 CLIC6Q96NY7 704 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 USP28Q96RU2 1077 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 MXRA8Q9BRK3 442 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 RBCK1Q9BYM8 510 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 TBC1D17Q9HA65 648 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 KCNK12Q9HB15 430 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
UBFD1-204ENST00000565634 FRMPD4Q14CM0 1322 aa6.89□□□□□ -1.31
UBFD1-204ENST00000565634 NAV2Q8IVL1 2488 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms