RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 PRKD2Q9BZL6 878 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
CDH3-204ENST00000565453 CNTN3Q9P232 1028 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 MYH11P35749 1972 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
CDH3-204ENST00000565453 UBA7P41226 1012 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 SMTNP53814 917 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 STRN3Q13033 797 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 ZPBP2Q6X784 338 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 TCHPQ9BT92 498 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 HAPLN2Q9GZV7 340 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 ODF2LQ9ULJ1 636 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 TRIOO75962 3097 aa17.15■□□□□ 0.34
CDH3-204ENST00000565453 VPS37CA5D8V6 355 aaPredicted RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 HARSP12081 509 aaKnown RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 PLCG1P19174 1290 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 BRCC3P46736 316 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 ZNF131P52739 623 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 MCL1Q07820 350 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 RAB33AQ14088 237 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 NOLC1Q14978 699 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDH3-204ENST00000565453 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 PTPAQ15257 358 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 RSPO2Q6UXX9 243 aaPredicted RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 RAD54LQ92698 747 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 STAMQ92783 540 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 DDX27Q96GQ7 796 aaKnown RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 MYADMQ96S97 322 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 KCNK12Q9HB15 430 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 SLC38A7Q9NVC3 462 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 LARSQ9P2J5 1176 aaKnown RBP17.14■□□□□ 0.33
CDH3-204ENST00000565453 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.33
CDH3-204ENST00000565453 I3L4J1 428 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 PODXLO00592 558 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
CDH3-204ENST00000565453 AVPR2P30518 371 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 RESTQ13127 1097 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 MCM6Q14566 821 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 SLC10A6Q3KNW5 377 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 HAUS6Q7Z4H7 955 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
CDH3-204ENST00000565453 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 IGSF9Q9P2J2 1179 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 ANKFY1Q9P2R3 1169 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 BACE2Q9Y5Z0 518 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
CDH3-204ENST00000565453 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
CDH3-204ENST00000565453 H0YCG3 227 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 C8AP07357 584 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 HNRNPA1P09651 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDH3-204ENST00000565453 PDCP20941 246 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 HOXA9P31269 272 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
CDH3-204ENST00000565453 OR1D2P34982 312 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 TCF15Q12870 199 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 TDGQ13569 410 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 DUSP12Q9UNI6 340 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 CITO14578 2027 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 DOCK8Q8NF50 2099 aa17.12■□□□□ 0.33
CDH3-204ENST00000565453 CLDN3O15551 220 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 TBC1D4O60343 1298 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 PIGRP01833 764 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 POU2F2P09086 479 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 SYT1P21579 422 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 RPL9P32969 192 aaKnown RBP17.11■□□□□ 0.33
CDH3-204ENST00000565453 DHX8Q14562 1220 aaKnown RBP17.11■□□□□ 0.33
CDH3-204ENST00000565453 LIN9Q5TKA1 542 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 ANKS3Q6ZW76 656 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
CDH3-204ENST00000565453 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 PRRX2Q99811 253 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
CDH3-204ENST00000565453 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 ZDBF2Q9HCK1 2354 aa17.11■□□□□ 0.33
CDH3-204ENST00000565453 TTC26A0AVF1 554 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 FAM189A1O60320 539 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 FAM13AO94988 1023 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 CXCL8P10145 99 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 MRPL58Q14197 206 aaKnown RBP17.1■□□□□ 0.33
CDH3-204ENST00000565453 PPM1LQ5SGD2 360 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
CDH3-204ENST00000565453 SLC8B1Q6J4K2 584 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 FAM173BQ6P4H8 233 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 GRASPQ7Z6J2 395 aaPredicted RBP17.1■□□□□ 0.33
CDH3-204ENST00000565453 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
CDH3-204ENST00000565453 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms