RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 NAGPAQ9UK23 515 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 CABYRO75952 493 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 HSPA8P11142 646 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 DARSP14868 501 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.274e-9■■■■■ 28.7
COMMD4-210ENST00000564587 TNFSF9P41273 254 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 CRYBB1P53674 252 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 NCOA4Q13772 614 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 SESTD1Q86VW0 696 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 SLC35F6Q8N357 371 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 CALR3Q96L12 384 aaKnown RBP16.75■□□□□ 0.27
COMMD4-210ENST00000564587 KREMEN1Q96MU8 473 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 AGPAT1Q99943 283 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 LACRTQ9GZZ8 138 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 XPNPEP3Q9NQH7 507 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 HDAC6Q9UBN7 1215 aa16.75■□□□□ 0.27
COMMD4-210ENST00000564587 M0QZ92 97 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 GPR25O00155 361 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 ADAMTS4O75173 837 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 LRRN2O75325 713 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 URI1O94763 535 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-210ENST00000564587 H2AFZP0C0S5 128 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
COMMD4-210ENST00000564587 GRM5P41594 1212 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 TRPC3Q13507 836 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 KIZQ2M2Z5 673 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 NOTUMQ6P988 496 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 H2AFVQ71UI9 128 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 ZNF677Q86XU0 584 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 KLHDC9Q8NEP7 349 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 RAET1EQ8TD07 263 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 ACAP3Q96P50 834 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 NOX5Q96PH1 765 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 SYT11Q9BT88 431 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-210ENST00000564587 PLEKHA5Q9HAU0 1116 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 GTF2IRD1Q9UHL9 959 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 NENFQ9UMX5 172 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 SCN10AQ9Y5Y9 1956 aa16.74■□□□□ 0.27
COMMD4-210ENST00000564587 A0A0A6YYK5 440 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-210ENST00000564587 A0A0U1RQJ8 604 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 RCCD1A6NED2 376 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 TREHO43280 583 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 FKTNO75072 461 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 SLU7O95391 586 aaKnown RBP16.73■□□□□ 0.27
COMMD4-210ENST00000564587 VNN1O95497 513 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 USP8P40818 1118 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 WNT7BP56706 349 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
COMMD4-210ENST00000564587 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-210ENST00000564587 SLC27A1Q6PCB7 646 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 RUFY4Q6ZNE9 571 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 RPAINQ86UA6 219 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 OR5B17Q8NGF7 314 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 DNAJB3Q8WWF6 145 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 ATRIPQ8WXE1 791 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 TATDN2Q93075 761 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 PPP1R16BQ96T49 567 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 IRX2Q9BZI1 471 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-210ENST00000564587 DERAQ9Y315 318 aa16.73■□□□□ 0.27
COMMD4-210ENST00000564587 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 MYADML2A6NDP7 307 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 DDX3XO00571 662 aaKnown RBP eCLIP16.72■□□□□ 0.273e-7■■□□□ 12.4
COMMD4-210ENST00000564587 ASS1P00966 412 aaKnown RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 UQCRHP07919 91 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 GZMAP12544 262 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 PDE6CP51160 858 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 TUBB4BP68371 445 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 NOP14P78316 857 aaKnown RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 TFAMQ00059 246 aaKnown RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 PTPN11Q06124 597 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 CUL2Q13617 745 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 PPP1R2P3Q6NXS1 205 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 RNF180Q86T96 592 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 SLAIN1Q8ND83 568 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 U2AF1L4Q8WU68 220 aaKnown RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 CPB2Q96IY4 423 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 FAM124BQ9H5Z6 455 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 DDX20Q9UHI6 824 aaKnown RBP16.72■□□□□ 0.27
COMMD4-210ENST00000564587 TSKSQ9UJT2 592 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 C2CD2Q9Y426 696 aa16.72■□□□□ 0.27
COMMD4-210ENST00000564587 JRKLQ9Y4A0 524 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms