RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 DCLK3Q9C098 648 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 GPRC5CQ9NQ84 441 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 GINM1Q9NU53 330 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 MAFGO15525 162 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 SNX3O60493 162 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 FDX1P10109 184 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 PPARDQ03181 441 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
USB1-207ENST00000563149 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
USB1-207ENST00000563149 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 TRIM72Q6ZMU5 477 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 CPNE8Q86YQ8 564 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 RELL1Q8IUW5 271 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 GBP7Q8N8V2 638 aaPredicted RBP13.96□□□□□ -0.17
USB1-207ENST00000563149 UHMK1Q8TAS1 419 aaKnown RBP13.96□□□□□ -0.17
USB1-207ENST00000563149 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 ACP6Q9NPH0 428 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 GEMIN8Q9NWZ8 242 aaKnown RBP13.96□□□□□ -0.17
USB1-207ENST00000563149 ACTL7BQ9Y614 415 aa13.96□□□□□ -0.17
USB1-207ENST00000563149 FAM170AA1A519 330 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 TP73O15350 636 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 PSTPIP1O43586 416 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 OAS1P00973 400 aaKnown RBP13.96□□□□□ -0.18
USB1-207ENST00000563149 KRT5P13647 590 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 ATF2P15336 505 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 SLCO1A2P46721 670 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 CCNG2Q16589 344 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 DYDC1Q8WWB3 177 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 POMGNT1Q8WZA1 660 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 VCPIP1Q96JH7 1222 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 MYCBPQ99417 103 aaPredicted RBP13.96□□□□□ -0.18
USB1-207ENST00000563149 CCDC77Q9BR77 488 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 PDCD2LQ9BRP1 358 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.18
USB1-207ENST00000563149 GLIS2Q9BZE0 524 aaPredicted RBP13.96□□□□□ -0.18
USB1-207ENST00000563149 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.18
USB1-207ENST00000563149 LGALS13Q9UHV8 139 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 ANAPC5Q9UJX4 755 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 MROH7Q68CQ1 1323 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 MYPNQ86TC9 1320 aa13.96□□□□□ -0.18
USB1-207ENST00000563149 PROSCO94903 275 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CHRNA5P30532 468 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 ITGA8P53708 1063 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CLDN10P78369 228 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 RIPK1Q13546 671 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 LONRF1Q17RB8 773 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 UBAP2Q5T6F2 1119 aaKnown RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 LIN9Q5TKA1 542 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 SLC39A4Q6P5W5 647 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 RIBC1Q8N443 379 aaPredicted RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 CCDC89Q8N998 374 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CCDC63Q8NA47 563 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CKAP2Q8WWK9 683 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 KCNN1Q92952 543 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 VEZTQ9HBM0 779 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CD248Q9HCU0 757 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 CHST7Q9NS84 486 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 TPX2Q9ULW0 747 aaKnown RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 USP15Q9Y4E8 981 aaPredicted RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 PCDHA10Q9Y5I2 948 aa13.95□□□□□ -0.18
USB1-207ENST00000563149 ZNFX1Q9P2E3 1918 aaKnown RBP13.95□□□□□ -0.18
USB1-207ENST00000563149 O00370 1275 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 SUN1O94901 812 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 CCNE2O96020 404 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 EIF2AK2P19525 551 aaKnown RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 MAP2K2P36507 400 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 ELF3P78545 371 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 LMNB2Q03252 620 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 STAT4Q14765 748 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 WDR44Q5JSH3 913 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 PLA2G4FQ68DD2 849 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 VSTM1Q6UX27 236 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ANO5Q75V66 913 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 RHOT1Q8IXI2 618 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 LARGE2Q8N3Y3 721 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 DDX23Q9BUQ8 820 aaKnown RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 TMEM39BQ9GZU3 492 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms