RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CMASQ8NFW8 434 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 CLIC6Q96NY7 704 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ACAP3Q96P50 834 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 DAXXQ9UER7 740 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 MIA3Q5JRA6 1907 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 CCDC195A0A1B0GUA6 201 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 ADAM12O43184 909 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 TBCAO75347 108 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 ASGR2P07307 311 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZNF131P52739 623 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 UPP1Q16831 310 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 CD300LGQ6UXG3 332 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 MYCT1Q8N699 235 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 KREMEN2Q8NCW0 462 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 SMG7Q92540 1137 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 C18orf25Q96B23 403 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 UROC1Q96N76 676 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 USP28Q96RU2 1077 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 CLSTN3Q9BQT9 956 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 PARVGQ9HBI0 331 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 CNTN3Q9P232 1028 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 DPP7Q9UHL4 492 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 KCNG1Q9UIX4 513 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 USTQ9Y2C2 406 aa18.81■□□□□ 0.6
CDC42BPB-208ENST00000561271 H0YCG3 227 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 HNRNPDLO14979 420 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 STX6O43752 255 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 CXCL8P10145 99 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 BRCC3P46736 316 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 SIGLEC14Q08ET2 396 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 LILRA6Q6PI73 481 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZNF707Q96C28 371 aaPredicted RBP18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 SLC38A7Q9NVC3 462 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 SORCS3Q9UPU3 1222 aa18.8■□□□□ 0.6
CDC42BPB-208ENST00000561271 CLUHO75153 1309 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 PODXLO00592 558 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 CLDN3O15551 220 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 KCNE1P15382 129 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 FGFR3P22607 806 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 PLA2G5P39877 138 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 LIG4P49917 911 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 MCL1Q07820 350 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 MTMR3Q13615 1198 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 SLC10A6Q3KNW5 377 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 DCLRE1AQ6PJP8 1040 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZDHHC14Q8IZN3 488 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 TMEM130Q8N3G9 435 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 HDAC7Q8WUI4 952 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 PLEKHA4Q9H4M7 779 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 TUBGCP4Q9UGJ1 667 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 SRPRBQ9Y5M8 271 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-208ENST00000561271 TRAK2O60296 914 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 TNFSF9P41273 254 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 SPAG1Q07617 926 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZBTB41Q5SVQ8 909 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 KCNN1Q92952 543 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 PBXIP1Q96AQ6 731 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 ACSF2Q96CM8 615 aaPredicted RBP18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 FIZ1Q96SL8 496 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 PIDD1Q9HB75 910 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 MTRRQ9UBK8 725 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 CCDC39Q9UFE4 941 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 DENND4CQ5VZ89 1909 aa18.78■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZNF638Q14966 1978 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 N4BP1O75113 896 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZMYND10O75800 440 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 C1RP00736 705 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 TXLNAP40222 546 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 LIN9Q5TKA1 542 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 PDXDC1Q6P996 788 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 DYMQ7RTS9 669 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 SNX21Q969T3 373 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 FAM122AQ96E09 287 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 RHOBTB2Q9BYZ6 727 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 WDR6Q9NNW5 1121 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZDHHC7Q9NXF8 308 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 CDY1Q9Y6F8 540 aa18.77■□□□□ 0.6
CDC42BPB-208ENST00000561271 TRAPPC3O43617 180 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 PIGRP01833 764 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 C8AP07357 584 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 GBP2P32456 591 aaPredicted RBP18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 OR1D2P34982 312 aa18.76■□□□□ 0.59
CDC42BPB-208ENST00000561271 DDIT3P35638 169 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms