RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 STYXL1Q9Y6J8 313 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 NT5C1B-RDH14C9J2C7 533 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 H7C4K7 107 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 PODXLO00592 558 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 KLRC4O43908 158 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 KIF4AO95239 1232 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 GALTP07902 379 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 KCNE1P15382 129 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 CYP3A5P20815 502 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 PRCPP42785 496 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 RBP5P82980 135 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 KCNA1Q09470 495 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
TPM1-229ENST00000561242 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 USP41Q3LFD5 358 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 INTS8Q75QN2 995 aaKnown RBP11.6□□□□□ -0.55
TPM1-229ENST00000561242 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 THEM5Q8N1Q8 247 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 CSGALNACT2Q8N6G5 542 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 NELFBQ8WX92 580 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 TCF25Q9BQ70 676 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 CBWD1Q9BRT8 395 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 TLE6Q9H808 572 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
TPM1-229ENST00000561242 TLR9Q9NR96 1032 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 CNTN3Q9P232 1028 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
TPM1-229ENST00000561242 PLAGL2Q9UPG8 496 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 C2CD2Q9Y426 696 aa11.6□□□□□ -0.55
TPM1-229ENST00000561242 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 BECN2A8MW95 431 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 PPP1R37O75864 691 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 CCNE1P24864 410 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 KLRC2P26717 231 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 ELF1P32519 619 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 SLC11A1P49279 550 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM1-229ENST00000561242 GRIN2CQ14957 1233 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 SLC10A6Q3KNW5 377 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 SV2CQ496J9 727 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 WDR44Q5JSH3 913 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 JADE1Q6IE81 842 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CAVIN1Q6NZI2 390 aaKnown RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 EPM2AIP1Q7L775 607 aaPredicted RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 DDX53Q86TM3 631 aaKnown RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 PPFIBP1Q86W92 1011 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 C12orf56Q8IXR9 622 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 VPS52Q8N1B4 723 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CEP120Q8N960 986 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 FIZ1Q96SL8 496 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
TPM1-229ENST00000561242 IGFLR1Q9H665 355 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM1-229ENST00000561242 DPP3Q9NY33 737 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 ADAM28Q9UKQ2 775 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 DSEQ9UL01 958 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 TRAF3IP3Q9Y228 551 aa11.59□□□□□ -0.55
TPM1-229ENST00000561242 MEIS3P2A8K0S8 358 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 C5orf67F2Z3F1 127 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 C2CD2LO14523 706 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 HUS1O60921 280 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 DDHD2O94830 711 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 ODC1P11926 461 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 TNFSF9P41273 254 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 GLUD2P49448 558 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 VAMP7P51809 220 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 NLRP12P59046 1061 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 SPAG1Q07617 926 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 STX1AQ16623 288 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 AAK1Q2M2I8 961 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 PLPP4Q5VZY2 271 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 Q7L0L9 218 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 SLC9A9Q8IVB4 645 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 SMYD4Q8IYR2 804 aaPredicted RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 KIAA0895Q8NCT3 520 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 MYLIPQ8WY64 445 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 OXCT2Q9BYC2 517 aaPredicted RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
TPM1-229ENST00000561242 CWH43Q9H720 699 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms