RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 FOXD4Q12950 439 aaPredicted RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 MTM1Q13496 603 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 VPS72Q15906 364 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 PGS1Q32NB8 556 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 KHDC1Q4VXA5 237 aaKnown RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 AFMIDQ63HM1 303 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 NXNQ6DKJ4 435 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 MIGA2Q7L4E1 593 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 ZNF572Q7Z3I7 529 aaPredicted RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 D2HGDHQ8N465 521 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 ZNF808Q8N4W9 903 aaPredicted RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 MB21D1Q8N884 522 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 NSUN6Q8TEA1 469 aaKnown RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 MVB12AQ96EY5 273 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 MRGPRX4Q96LA9 322 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 TAAR9Q96RI9 348 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 ACO2Q99798 780 aaKnown RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 ARNT2Q9HBZ2 717 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 LANCL2Q9NS86 450 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 DDX20Q9UHI6 824 aaKnown RBP4.28□□□□□ -1.72
USP8-217ENST00000561211 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 SLC30A1Q9Y6M5 507 aa4.28□□□□□ -1.72
USP8-217ENST00000561211 CXorf49A8MYA2 514 aaPredicted RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 IFRD1O00458 451 aaPredicted RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 ZNF623O75123 536 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 GPR32O75388 356 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 OFD1O75665 1012 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 RAP2AP10114 183 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 ATF3P18847 181 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 VCAM1P19320 739 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 HK1P19367 917 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 MAP2K6P52564 334 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 CDC42EP1Q00587 391 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 KLF10Q13118 480 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 SNAPC2Q13487 334 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 GTF2H3Q13889 308 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 DHX8Q14562 1220 aaKnown RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 ELAVL1Q15717 326 aaKnown RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 FAM47AQ5JRC9 791 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 CXorf57Q6NSI4 855 aaKnown RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 SGMS1Q86VZ5 419 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 COL23A1Q86Y22 540 aaPredicted RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 DRC7Q8IY82 874 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 SAMD3Q8N6K7 520 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 ZBTB34Q8NCN2 500 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 RNF169Q8NCN4 708 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 IFI44Q8TCB0 444 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 DIS3LQ8TF46 1054 aaKnown RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 PGBD4Q96DM1 585 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 CCDC136Q96JN2 1154 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 AIFM3Q96NN9 605 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 MAP3K14Q99558 947 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 CPPED1Q9BRF8 314 aaPredicted RBP4.27□□□□□ -1.73
USP8-217ENST00000561211 MRI1Q9BV20 369 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 PCED1AQ9H1Q7 454 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 MANSC1Q9H8J5 431 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 CHST12Q9NRB3 414 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 TMEM140Q9NV12 185 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 PCDHA3Q9Y5H8 950 aa4.27□□□□□ -1.73
USP8-217ENST00000561211 TCRBV7S2A1N4TA0A589 114 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 CCDC189A1A4V9 331 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 TBKBP1A7MCY6 615 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 VSTM5A8MXK1 200 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 LDHAP00338 332 aaKnown RBP4.26□□□□□ -1.73
USP8-217ENST00000561211 FGAP02671 866 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 IL2RBP14784 551 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 HSPA6P17066 643 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 BDNFP23560 247 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 FLT3LGP49771 235 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 RAP2BP61225 183 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 TLE1Q04724 770 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 SP140Q13342 867 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 CRB2Q5IJ48 1285 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 C1QL3Q5VWW1 255 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 MAMDC4Q6UXC1 1216 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 Q6ZRM9 215 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 PDZD4Q76G19 769 aaPredicted RBP4.26□□□□□ -1.73
USP8-217ENST00000561211 UBE3BQ7Z3V4 1068 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 POLNQ7Z5Q5 900 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 RUNDC1Q96C34 613 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 CYFIP2Q96F07 1278 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 SLITRK6Q9H5Y7 841 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 SPON1Q9HCB6 807 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 NMRK2Q9NPI5 230 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.26□□□□□ -1.73
USP8-217ENST00000561211 HS3ST3A1Q9Y663 406 aa4.26□□□□□ -1.73
USP8-217ENST00000561211 CFAP20Q9Y6A4 193 aaKnown RBP4.26□□□□□ -1.73
USP8-217ENST00000561211 A6NNZ2 444 aa4.25□□□□□ -1.73
USP8-217ENST00000561211 CAPN14A8MX76 684 aa4.25□□□□□ -1.73
USP8-217ENST00000561211 SGTAO43765 313 aa4.25□□□□□ -1.73
USP8-217ENST00000561211 CTNND1O60716 968 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms