RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 E2F4Q16254 413 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TPRNQ4KMQ1 711 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 HERC4Q5GLZ8 1057 aaPredicted RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 LILRA6Q6PI73 481 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 SHC4Q6S5L8 630 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZPBP2Q6X784 338 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 CEP57Q86XR8 500 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 PDILTQ8N807 584 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZSWIM2Q8NEG5 633 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 PIK3R5Q8WYR1 880 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 DDX12PQ92771 950 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 FAM84AQ96KN4 292 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 POP1Q99575 1024 aaKnown RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZSCAN16Q9H4T2 348 aaPredicted RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 SFXN1Q9H9B4 322 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TSHZ2Q9NRE2 1034 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TBC1D7Q9P0N9 293 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 LARSQ9P2J5 1176 aaKnown RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZDHHC9Q9Y397 364 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TECTAO75443 2155 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 TMEM189-UBE2V1I3L0A0 370 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 TRAK2O60296 914 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 TBCAO75347 108 aaKnown RBP13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 B3GAT3O94766 335 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 GLUD1P00367 558 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 ASGR2P07307 311 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 FGFR3P22607 806 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 DDIT3P35638 169 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 STK38Q15208 465 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 PSMD5Q16401 504 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 TMEM31Q5JXX7 168 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 AXDND1Q5T1B0 1012 aaPredicted RBP13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 GPR149Q86SP6 731 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 MAP4K3Q8IVH8 894 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 BICD1Q96G01 975 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 ACAP3Q96P50 834 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 STRA6Q9BX79 667 aa13.84□□□□□ -0.19
CHRNA3-208ENST00000561128 A0A0B4J269 797 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 PODXLO00592 558 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 HNRNPDLO14979 420 aaKnown RBP13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 SPTLC2O15270 562 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 GPR37L1O60883 481 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 NR1I2O75469 434 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 ADH1AP07327 375 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 CASP1P29466 404 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 LIG4P49917 911 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 SMTNP53814 917 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 GTF2BQ00403 316 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 ITIH3Q06033 890 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 ST13P5Q8NFI4 369 aaPredicted RBP13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 C1QTNF1Q9BXJ1 281 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
CHRNA3-208ENST00000561128 KMT2EQ8IZD2 1858 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 MTCL1Q9Y4B5 1905 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 FRMD3A2A2Y4 597 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 NRG2O14511 850 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 CLDN3O15551 220 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 NFICP08651 508 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 ADSSP30520 456 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 STAT6P42226 847 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 YARSP54577 528 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 NTHL1P78549 312 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 DNM1Q05193 864 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 ZBTB6Q15916 424 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 HFE2Q6ZVN8 426 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 TMEM87AQ8NBN3 555 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 TOPORSQ9NS56 1045 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 FBXW11Q9UKB1 542 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
CHRNA3-208ENST00000561128 DOCK6Q96HP0 2047 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 CCDC195A0A1B0GUA6 201 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 OGTO15294 1046 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 PAPLNO95428 1278 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 YEATS4O95619 227 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 PDGFBP01127 241 aaPredicted RBP13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 MTHFRP42898 656 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 ACOT2P49753 483 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 DCLRE1AQ6PJP8 1040 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms