RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 RPAP1Q9BWH6 1393 aaPredicted RBP5.55□□□□□ -1.52
AP4E1-204ENST00000561004 EIF5BO60841 1220 aaKnown RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 LARGE1O95461 756 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 HSPD1P10809 573 aaKnown RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 ITGB6P18564 788 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 IL12RB1P42701 662 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 NEK4P51957 841 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 GABREP78334 506 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 BECN1Q14457 450 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 FAM209AQ5JX71 171 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 TTLL5Q6EMB2 1281 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 OLFM4Q6UX06 510 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 ZSWIM2Q8NEG5 633 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 EXOC2Q96KP1 924 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 UPF3BQ9BZI7 483 aaKnown RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 MEGF9Q9H1U4 602 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 SMOC1Q9H4F8 434 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 MRPS23Q9Y3D9 190 aaKnown RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 SIT1Q9Y3P8 196 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 DMRT1Q9Y5R6 373 aa5.54□□□□□ -1.52
AP4E1-204ENST00000561004 BAZ2BQ9UIF8 2168 aaKnown RBP5.54□□□□□ -1.52
AP4E1-204ENST00000561004 ZNF532Q9HCE3 1301 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 WNT9AO14904 365 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 RAMP2O60895 175 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 DTNBO60941 627 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 CYP21A2P08686 494 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 MMP10P09238 476 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 C6orf222P0C671 652 aaPredicted RBP5.53□□□□□ -1.52
AP4E1-204ENST00000561004 SRGNP10124 158 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 PDE6AP16499 860 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 NKX3-2P78367 333 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ST5P78524 1137 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ST3GAL1Q11201 340 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 RUFY3Q7L099 469 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 MILR1Q7Z6M3 343 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 HSCBQ8IWL3 235 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ZGPATQ8N5A5 531 aaKnown RBP5.53□□□□□ -1.52
AP4E1-204ENST00000561004 APPBP2Q92624 585 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 RBM17Q96I25 401 aaKnown RBP5.53□□□□□ -1.52
AP4E1-204ENST00000561004 TMX3Q96JJ7 454 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 CLIC6Q96NY7 704 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 PTPN18Q99952 460 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 TM6SF1Q9BZW5 370 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 SLC6A20Q9NP91 592 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ZDHHC9Q9Y397 364 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 SNED1Q8TER0 1413 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 ATAD5Q96QE3 1844 aa5.53□□□□□ -1.52
AP4E1-204ENST00000561004 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 BLACEA4D250 179 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 FAM47E-STBD1D6RA91 191 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 SMIM22K7EJ46 135 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 KRIT1O00522 736 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 GPAA1O43292 621 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 IDH1O75874 414 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 FGAP02671 866 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 ZFYP08048 801 aaPredicted RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 COMTP21964 271 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 GRK2P25098 689 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 GRK3P35626 688 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 AK2P54819 239 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 MRPS21P82921 87 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 NFATC3Q12968 1075 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 CUL4AQ13619 759 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 C2orf27AQ580R0 203 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 HABP4Q5JVS0 413 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 SLC9C2Q5TAH2 1124 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 C15orf52Q6ZUT6 534 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 STK32CQ86UX6 486 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 LILRB2Q8N423 598 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 MAGEB6Q8N7X4 407 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 GIMAP8Q8ND71 665 aaPredicted RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 TDRD7Q8NHU6 1098 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 EXTL1Q92935 676 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 MRFAP1L1Q96HT8 127 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 TCEANC2Q96MN5 208 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 JAKMIP1Q96N16 626 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
AP4E1-204ENST00000561004 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 ANKRD2Q9GZV1 360 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 POLLQ9UGP5 575 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 DENND2AQ9ULE3 1009 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 NUB1Q9Y5A7 615 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 COL4A5P29400 1685 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 SMCHD1A6NHR9 2005 aa5.52□□□□□ -1.53
AP4E1-204ENST00000561004 XDHP47989 1333 aa5.51□□□□□ -1.53
AP4E1-204ENST00000561004 TCRBV5S2A0A599 114 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms