RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CCDC116Q8IYX3 515 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 MYCBPAPQ8TBZ2 947 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 NANOS1Q8WY41 292 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 MRPS27Q92552 414 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 BICD1Q96G01 975 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CCT8L2Q96SF2 557 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF576Q9H609 170 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ARMT1Q9H993 441 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CCM2LQ9NUG4 571 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 XIRP1Q702N8 1843 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 COL18A1P39060 1754 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A096LPE4 126 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 GOLGA6L10A6NI86 522 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 IPO5O00410 1097 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ACKR2O00590 384 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 LUC7L3O95232 432 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 S1PR4O95977 384 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF132P52740 706 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PMS1P54277 932 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ELF3P78545 371 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 GUCY1A3Q02108 690 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CUL3Q13618 768 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 LACTB2Q53H82 288 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 KAZNQ674X7 775 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 KDM7AQ6ZMT4 941 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 UBE2R2Q712K3 238 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 G2E3Q7L622 706 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 NLRP14Q86W24 1093 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 SULF2Q8IWU5 870 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC35F6Q8N357 371 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PPP1R14CQ8TAE6 165 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 MIPOL1Q8TD10 442 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 GDAP1L1Q96MZ0 367 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 UBN1Q9NPG3 1134 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 OLA1Q9NTK5 396 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 INTS13Q9NVM9 706 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 NEDD4P46934 1319 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 H3BQV1 296 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 SMIM24O75264 130 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 APOA4P06727 396 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 POU2F2P09086 479 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PLCG1P19174 1290 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 ADKP55263 362 aaKnown RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 MYL5Q02045 173 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 RIPK1Q13546 671 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 STARD3Q14849 445 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TTMPQ5BVD1 217 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 IFFO2Q5TF58 517 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM68Q6AZZ1 485 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 DSTYKQ6XUX3 929 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 USP53Q70EK8 1073 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 APLFQ8IW19 511 aaPredicted RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 SAMD14Q8IZD0 417 aaPredicted RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 MIER2Q8N344 545 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 AENQ8WTP8 325 aaKnown RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 LRRC59Q96AG4 307 aaKnown RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 MAP3K14Q99558 947 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 YIPF2Q9BWQ6 316 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM4Q9C037 500 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM165Q9HC07 324 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 SENP2Q9HC62 589 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PICK1Q9NRD5 415 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 MYO1AQ9UBC5 1043 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM184BQ9ULE4 1060 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1W2PQ27 194 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1W2PQ64 194 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1W2PQD8 194 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 TRAF5O00463 557 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 KCNK3O14649 394 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PSAPP07602 524 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 CTSSP25774 331 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 STAT1P42224 750 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 SPARCL1Q14515 664 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 MTF1Q14872 753 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 SPECC1LQ69YQ0 1117 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 CISD2Q8N5K1 135 aaKnown RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PCYOX1LQ8NBM8 494 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 CENPIQ92674 756 aaPredicted RBP7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 P3H4Q92791 437 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 HPS3Q969F9 1004 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PLPPR2Q96GM1 343 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 PANX2Q96RD6 677 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 ARHGAP28Q9P2N2 729 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 ABCF2Q9UG63 623 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 CSADQ9Y600 493 aa7.24□□□□□ -1.25
TSPAN3-209ENST00000560715 KDM6AO15550 1401 aaPredicted RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1B0GVL5 298 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 GOLGA8AA7E2F4 631 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 GOLGA8BA8MQT2 603 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 MAN1A2O60476 641 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 C5AR1P21730 350 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 KIF5BP33176 963 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 HADHAP40939 763 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 GPR3P46089 330 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 ME1P48163 572 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms