RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 INTS4Q96HW7 963 aaKnown RBP15.4■□□□□ 0.06
TPM1-223ENST00000560445 SNX27Q96L92 541 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PNMA5Q96PV4 448 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 CNTN3Q9P232 1028 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 ANKFY1Q9P2R3 1169 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 LIMD1Q9UGP4 676 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 FBXW11Q9UKB1 542 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 NUB1Q9Y5A7 615 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 BACE2Q9Y5Z0 518 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 F8W810 466 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 HNRNPDLO14979 420 aaKnown RBP15.39■□□□□ 0.05
TPM1-223ENST00000560445 SYN3O14994 580 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 CD2BP2O95400 341 aaKnown RBP15.39■□□□□ 0.05
TPM1-223ENST00000560445 CLTAP09496 248 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 MAPTP10636 758 aaKnown RBP15.39■□□□□ 0.05
TPM1-223ENST00000560445 LIG4P49917 911 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 UPP1Q16831 310 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 LILRA6Q6PI73 481 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 B3GALT6Q96L58 329 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 OXCT2Q9BYC2 517 aaPredicted RBP15.39■□□□□ 0.05
TPM1-223ENST00000560445 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 MTRRQ9UBK8 725 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 CDH22Q9UJ99 828 aa15.39■□□□□ 0.05
TPM1-223ENST00000560445 C2orf16Q68DN1 1984 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 EDN1P05305 212 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 HARSP12081 509 aaKnown RBP15.38■□□□□ 0.05
TPM1-223ENST00000560445 CLCNKBP51801 687 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 NCKAP1LP55160 1127 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 OSTNP61366 133 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 MCL1Q07820 350 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 RAD51AP2Q09MP3 1159 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 RAB33AQ14088 237 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 SF3A1Q15459 793 aaKnown RBP15.38■□□□□ 0.05
TPM1-223ENST00000560445 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
TPM1-223ENST00000560445 GLYCTKQ8IVS8 523 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 KRI1Q8N9T8 703 aaKnown RBP15.38■□□□□ 0.05
TPM1-223ENST00000560445 LNX1Q8TBB1 728 aaPredicted RBP15.38■□□□□ 0.05
TPM1-223ENST00000560445 PAAF1Q9BRP4 392 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 FBXL21Q9UKT6 434 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 MAFFQ9ULX9 164 aa15.38■□□□□ 0.05
TPM1-223ENST00000560445 TRIOO75962 3097 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 SFI1A8K8P3 1242 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 K7ENM7 598 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 PODXLO00592 558 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 RFPL2O75678 378 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 C8AP07357 584 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 RFX1P22670 979 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 FSHRP23945 695 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 ELF1P32519 619 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 PPP2R3AQ06190 1150 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 KANK3Q6NY19 840 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 ALKAL1Q6UXT8 129 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 HAUS6Q7Z4H7 955 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 CD302Q8IX05 232 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 LARP4BQ92615 738 aaKnown RBP15.37■□□□□ 0.05
TPM1-223ENST00000560445 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 RAD54LQ92698 747 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 ZNF707Q96C28 371 aaPredicted RBP15.37■□□□□ 0.05
TPM1-223ENST00000560445 PLIN2Q99541 437 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 CLSTN3Q9BQT9 956 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 BACH2Q9BYV9 841 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
TPM1-223ENST00000560445 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 POLD4Q9HCU8 107 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 DUSP12Q9UNI6 340 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 USP20Q9Y2K6 914 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 MYO10Q9HD67 2058 aa15.37■□□□□ 0.05
TPM1-223ENST00000560445 ASGR2P07307 311 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 SPATA31D3P0C874 917 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
TPM1-223ENST00000560445 PLCG1P19174 1290 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 CLCN5P51795 746 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 ZNF131P52739 623 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 NHLH1Q02575 133 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 SPATA31D4Q6ZUB0 917 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 MTSS1LQ765P7 747 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 TAS1R3Q7RTX0 852 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 ZHX3Q9H4I2 956 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 SEL1LQ9UBV2 794 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 KCNH3Q9ULD8 1083 aa15.36■□□□□ 0.05
TPM1-223ENST00000560445 UBQLN1Q9UMX0 589 aaKnown RBP15.36■□□□□ 0.05
TPM1-223ENST00000560445 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
TPM1-223ENST00000560445 TRIP11Q15643 1979 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 TRAK2O60296 914 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 PIGRP01833 764 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 CYP3A5P20815 502 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
TPM1-223ENST00000560445 AVPR2P30518 371 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 MCM4P33991 863 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 OR1D2P34982 312 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 AXDND1Q5T1B0 1012 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms