RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 DDX19AQ9NUU7 478 aaKnown RBP14.89□□□□□ -0.03
SMAD3-214ENST00000560402 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 CACNG4Q9UBN1 327 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 MIA3Q5JRA6 1907 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 K7ERI5 159 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 TRAPPC3O43617 180 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 NARSO43776 548 aaKnown RBP14.88□□□□□ -0.03
SMAD3-214ENST00000560402 CFHP08603 1231 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 FGFR3P22607 806 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 FSHRP23945 695 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 GRM5P41594 1212 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
SMAD3-214ENST00000560402 HTR4Q13639 388 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 RAB33AQ14088 237 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 ECM1Q16610 540 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 UVSSAQ2YD98 709 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 KRT79Q5XKE5 535 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 KCTD17Q8N5Z5 321 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 C4orf32Q8N8J7 132 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 KIFC3Q9BVG8 833 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 TIPINQ9BVW5 301 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
SMAD3-214ENST00000560402 TMEM134Q9H6X4 195 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 SLC2A4RGQ9NR83 387 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 SLC38A7Q9NVC3 462 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 GDAQ9Y2T3 454 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 ZFHX2Q9C0A1 2572 aaPredicted RBP14.88□□□□□ -0.03
SMAD3-214ENST00000560402 DOCK6Q96HP0 2047 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 TCHHQ07283 1943 aa14.88□□□□□ -0.03
SMAD3-214ENST00000560402 PRR23AA6NEV1 266 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 B3GAT3O94766 335 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 MYBP10242 640 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 PTGDRQ13258 359 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 ZNF568Q3ZCX4 644 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 NT5DC1Q5TFE4 455 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 DCLRE1AQ6PJP8 1040 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 ANKS3Q6ZW76 656 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 MTSS1LQ765P7 747 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 DTWD2Q8NBA8 298 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 RSAD2Q8WXG1 361 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 MRPL4Q9BYD3 311 aaKnown RBP14.87□□□□□ -0.03
SMAD3-214ENST00000560402 ARHGEF3Q9NR81 526 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 ARHGAP28Q9P2N2 729 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 CDH7Q9ULB5 785 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 BACE2Q9Y5Z0 518 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 DMDP11532 3685 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 FAM186AA6NE01 2351 aa14.87□□□□□ -0.03
SMAD3-214ENST00000560402 CFAP54Q96N23 3096 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 GOLGA6L3A6NEY3 463 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 NPTX2P47972 431 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 PEX3P56589 373 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 ANGPT1Q15389 498 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 UPP1Q16831 310 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 GLRA4Q5JXX5 417 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-214ENST00000560402 SLC7A14Q8TBB6 771 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 GPR152Q8TDT2 470 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
SMAD3-214ENST00000560402 ACO2Q99798 780 aaKnown RBP14.86□□□□□ -0.03
SMAD3-214ENST00000560402 SCAND2PQ9GZW5 306 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-214ENST00000560402 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-214ENST00000560402 CDT1Q9H211 546 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 TBC1D17Q9HA65 648 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 KCNG1Q9UIX4 513 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 USP20Q9Y2K6 914 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 NUMBLQ9Y6R0 609 aa14.86□□□□□ -0.03
SMAD3-214ENST00000560402 FANCMQ8IYD8 2048 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 NOTCH4Q99466 2003 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 VPS13AQ96RL7 3174 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 CCDC169A6NNP5 214 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 PI15O43692 258 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 MCF2P10911 925 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 GUCY2CP25092 1073 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 CLCNKBP51801 687 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 AXDND1Q5T1B0 1012 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-214ENST00000560402 ATL3Q6DD88 541 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 DTHD1Q6ZMT9 781 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 ASCL5Q7RTU5 278 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 DAW1Q8N136 415 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 NKD2Q969F2 451 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-214ENST00000560402 SHDQ96IW2 340 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 SNX27Q96L92 541 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 CXCL16Q9H2A7 254 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 PTPRHQ9HD43 1115 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 KMT5AQ9NQR1 393 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
SMAD3-214ENST00000560402 CFAP45Q9UL16 551 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 KCNH3Q9ULD8 1083 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 CA14Q9ULX7 337 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
SMAD3-214ENST00000560402 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms