RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 SNX27Q96L92 541 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 CITO14578 2027 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 C2orf16Q68DN1 1984 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 MYMKA6NI61 221 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 TRAK2O60296 914 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 TOM1L1O75674 476 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 TKTP29401 623 aaKnown RBP13.68□□□□□ -0.22
SMAD3-208ENST00000558827 ZXDAP98168 799 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 PKP1Q13835 747 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 SLC39A14Q15043 492 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 RSPO2Q6UXX9 243 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-208ENST00000558827 SFR1Q86XK3 245 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-208ENST00000558827 NECTIN4Q96NY8 510 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-208ENST00000558827 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 STK39Q9UEW8 545 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 TUBGCP4Q9UGJ1 667 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
SMAD3-208ENST00000558827 PODXLO00592 558 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
SMAD3-208ENST00000558827 SLC26A4O43511 780 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 IDEP14735 1019 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 OR1D2P34982 312 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 ARPP19P56211 112 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 UPP1Q16831 310 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 SLC39A4Q6P5W5 647 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
SMAD3-208ENST00000558827 TDRD5Q8NAT2 981 aaKnown RBP13.67□□□□□ -0.22
SMAD3-208ENST00000558827 SMG7Q92540 1137 aaKnown RBP13.67□□□□□ -0.22
SMAD3-208ENST00000558827 EDAQ92838 391 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-208ENST00000558827 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 ZMYM2Q9UBW7 1377 aa13.67□□□□□ -0.22
SMAD3-208ENST00000558827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-208ENST00000558827 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 LACTBL1A8MY62 500 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 M0R296 226 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 BRD1O95696 1058 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 TXLNAP40222 546 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 STAT6P42226 847 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 ZNF131P52739 623 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 NTHL1P78549 312 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 MCL1Q07820 350 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 XKR4Q5GH76 650 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 PIK3R5Q8WYR1 880 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 DDX12PQ92771 950 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-208ENST00000558827 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 FIZ1Q96SL8 496 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 MSTO1Q9BUK6 570 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMAD3-208ENST00000558827 FNIP2Q9P278 1114 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 KCNG1Q9UIX4 513 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 POLIQ9UNA4 740 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
SMAD3-208ENST00000558827 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 MTCL1Q9Y4B5 1905 aaKnown RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 H0YCG3 227 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 SPTLC2O15270 562 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 CCL16O15467 120 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 KCNE1P15382 129 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 FGFR3P22607 806 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 ACOT2P49753 483 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 CDR1P51861 262 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 KCNA1Q09470 495 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 ZNF396Q96N95 335 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms