RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CYP2C18P33260 490 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 CCL23P55773 120 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 CNKSR3Q6P9H4 555 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 ZNF598Q86UK7 904 aaKnown RBP16.08■□□□□ 0.16
VPS18-202ENST00000558474 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 RPUSD2Q8IZ73 545 aaKnown RBP16.08■□□□□ 0.16
VPS18-202ENST00000558474 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 NEK11Q8NG66 645 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 FAXDC2Q96IV6 333 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 PCMTD1Q96MG8 357 aaPredicted RBP16.08■□□□□ 0.16
VPS18-202ENST00000558474 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
VPS18-202ENST00000558474 RAB20Q9NX57 234 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 PARP2Q9UGN5 583 aa16.08■□□□□ 0.16
VPS18-202ENST00000558474 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 SCN5AQ14524 2016 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRIM43BA6NCK2 446 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRIM21P19474 475 aaKnown RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 WNT7BP56706 349 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TDRD10Q5VZ19 366 aaKnown RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 JADE1Q6IE81 842 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRIM65Q6PJ69 517 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 LMO3Q8TAP4 145 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TAF4BQ92750 862 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRIM43Q96BQ3 446 aaPredicted RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 SCLYQ96I15 445 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 SLC38A7Q9NVC3 462 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 PRKAG2Q9UGJ0 569 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 ITGA11Q9UKX5 1188 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 CAPN11Q9UMQ6 739 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
VPS18-202ENST00000558474 HES2Q9Y543 173 aa16.07■□□□□ 0.16
VPS18-202ENST00000558474 TRIP11Q15643 1979 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 LTBP2Q14767 1821 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 ENPP3O14638 875 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 AKAP5P24588 427 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 ATICP31939 592 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
VPS18-202ENST00000558474 IKBKEQ14164 716 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 KLHDC7AQ5VTJ3 777 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 FMNL3Q8IVF7 1028 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 CCDC150Q8NCX0 1101 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
VPS18-202ENST00000558474 BEST2Q8NFU1 509 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 OR5B17Q8NGF7 314 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 KIF12Q96FN5 646 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 ABHD8Q96I13 439 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 IMPG2Q9BZV3 1241 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 TTYH3Q9C0H2 523 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
VPS18-202ENST00000558474 RSAD1Q9HA92 442 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
VPS18-202ENST00000558474 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 CEP72Q9P209 647 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 MICAL3Q7RTP6 2002 aa16.06■□□□□ 0.16
VPS18-202ENST00000558474 SMIM28A0A1B0GU29 152 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 ABHD14A-ACY1A0A1B0GW23 586 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 HOXA2O43364 376 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 PHACTR2O75167 634 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 STAU1O95793 577 aaKnown RBP16.05■□□□□ 0.16
VPS18-202ENST00000558474 GYPCP04921 128 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 NFICP08651 508 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
VPS18-202ENST00000558474 SLC9A1P19634 815 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 BIRC3Q13489 604 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 NCOA4Q13772 614 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 SGSM1Q2NKQ1 1148 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 WDR44Q5JSH3 913 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 DPY19L2P1Q6NXN4 242 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 AGMOQ6ZNB7 445 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 ENOSF1Q7L5Y1 443 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 JAKMIP2Q96AA8 810 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 RPS6KC1Q96S38 1066 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 LSM14BQ9BX40 385 aaKnown RBP16.05■□□□□ 0.16
VPS18-202ENST00000558474 MTMR12Q9C0I1 747 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 VRTNQ9H8Y1 702 aa16.05■□□□□ 0.16
VPS18-202ENST00000558474 LUC7L2Q9Y383 392 aaKnown RBP16.05■□□□□ 0.16
VPS18-202ENST00000558474 AKR1B15C9JRZ8 316 aaPredicted RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 BAIAP3O94812 1187 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 NOL4O94818 638 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 VNN1O95497 513 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms