RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 IL17AQ16552 155 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 ZNF568Q3ZCX4 644 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 CYP26C1Q6V0L0 522 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 ZPBP2Q6X784 338 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 BSNDQ8WZ55 320 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 KCNN1Q92952 543 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 ZFP42Q96MM3 310 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 USP15Q9Y4E8 981 aaPredicted RBP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 HES2Q9Y543 173 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 RBAK-RBAKDNI3L0D1 243 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 DCXO43602 365 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TADA2AO75478 443 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 RECQL4O94761 1208 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 KRT18P05783 430 aaKnown RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 MCF2P10911 925 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 SYT1P21579 422 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 AKAP5P24588 427 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 KLRC2P26717 231 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 CDC25AP30304 524 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 USP41Q3LFD5 358 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 SUSD6Q92537 303 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 ADAM7Q9H2U9 754 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 ADAM28Q9UKQ2 775 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 PRG3Q9Y2Y8 225 aaPredicted RBP12.51□□□□□ -0.41
LINC00648-204ENST00000557749 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
LINC00648-204ENST00000557749 BDP1A6H8Y1 2624 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 STX6O43752 255 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 GPR37L1O60883 481 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 TOM1L1O75674 476 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 FAM13AO94988 1023 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 BRD1O95696 1058 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 CTHP32929 405 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 GRM5P41594 1212 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 DSG1Q02413 1049 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 ATAT1Q5SQI0 421 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 LLGL2Q6P1M3 1020 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 TMEM173Q86WV6 379 aaPredicted RBP12.5□□□□□ -0.41
LINC00648-204ENST00000557749 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
LINC00648-204ENST00000557749 TSPAN18Q96SJ8 248 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 ACO2Q99798 780 aaKnown RBP12.5□□□□□ -0.41
LINC00648-204ENST00000557749 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 SNTG2Q9NY99 539 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 REV3LO60673 3130 aa12.5□□□□□ -0.41
LINC00648-204ENST00000557749 TMEM189-UBE2V1I3L0A0 370 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 GLUD1P00367 558 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 CCDC73Q6ZRK6 1079 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 GPBP1Q86WP2 473 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
LINC00648-204ENST00000557749 DAW1Q8N136 415 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 GSTCDQ8NEC7 633 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
LINC00648-204ENST00000557749 RAD54LQ92698 747 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 ACAP3Q96P50 834 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 KLHL5Q96PQ7 755 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 PNMA5Q96PV4 448 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 PLEKHA4Q9H4M7 779 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 RXFP1Q9HBX9 757 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 FNIP2Q9P278 1114 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 SEL1LQ9UBV2 794 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
LINC00648-204ENST00000557749 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
LINC00648-204ENST00000557749 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 SLC16A4O15374 487 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 CLDN3O15551 220 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
LINC00648-204ENST00000557749 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
LINC00648-204ENST00000557749 PLCG1P19174 1290 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 DDIT3P35638 169 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 AFF1P51825 1210 aaKnown RBP12.48□□□□□ -0.41
LINC00648-204ENST00000557749 RESTQ13127 1097 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 MAPK7Q13164 816 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 NOLC1Q14978 699 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00648-204ENST00000557749 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
LINC00648-204ENST00000557749 NT5DC1Q5TFE4 455 aa12.48□□□□□ -0.41
LINC00648-204ENST00000557749 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms