RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 TCP10Q12799 353 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PTP4A2Q12974 167 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 CALCOCO2Q13137 446 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PPIL2Q13356 520 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PDCLQ13371 301 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 CTTNQ14247 550 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 ENOX2Q16206 610 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 AAK1Q2M2I8 961 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 KRT71Q3SY84 523 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 EPC2Q52LR7 807 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 C9orf50Q5SZB4 431 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PCNX4Q63HM2 1172 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 KRT39Q6A163 491 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PADI6Q6TGC4 694 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 TRIM72Q6ZMU5 477 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 ANKRD23Q86SG2 305 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 CLEC10AQ8IUN9 316 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 FAM71AQ8IYT1 594 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 CNPY4Q8N129 248 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 GBP7Q8N8V2 638 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PRPF38AQ8NAV1 312 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 LNX1Q8TBB1 728 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 MAGEC3Q8TD91 643 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 SPIRE2Q8WWL2 714 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 TLCD1Q96CP7 247 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 ZBED3Q96IU2 234 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 WRNIP1Q96S55 665 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 FIZ1Q96SL8 496 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 ZSWIM1Q9BR11 485 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 LXNQ9BS40 222 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 DDX47Q9H0S4 455 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 YY1AP1Q9H869 796 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PPCSQ9HAB8 311 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 TMEM8AQ9HCN3 771 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 AVENQ9NQS1 362 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 RGL1Q9NZL6 768 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 EHD2Q9NZN4 543 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 WHRNQ9P202 907 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 CTTNBP2NLQ9P2B4 639 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 AMACRQ9UHK6 382 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 SLC12A6Q9UHW9 1150 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 PCDHA3Q9Y5H8 950 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 ALG6Q9Y672 507 aa7.8□□□□□ -1.16
MTHFD1-215ENST00000557370 A0A1B0GUA9 196 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ESYT3A0FGR9 886 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 K7ENM7 598 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 WDR46O15213 610 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 TTI1O43156 1089 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 DAPK3O43293 454 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 HIP1RO75146 1068 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 STAM2O75886 525 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 FTLP02792 175 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CYP1A2P05177 515 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 VCAM1P19320 739 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ITIH2P19823 946 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 GARTP22102 1010 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 NMT1P30419 496 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 RDXP35241 583 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 MXI1P50539 228 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 PDE6CP51160 858 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 DNA2P51530 1060 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CYP2J2P51589 502 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 GPC3P51654 580 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 NCKAP1LP55160 1127 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 RWDD2BP57060 319 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 PSMC5P62195 406 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 MAP3K10Q02779 954 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ACTN3Q08043 901 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 NR1H3Q13133 447 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ITIH4Q14624 930 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 SKIV2LQ15477 1246 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 LACTB2Q53H82 288 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 KCTD16Q68DU8 428 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 MFSD5Q6N075 450 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CCDC174Q6PII3 467 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 FOXR1Q6PIV2 292 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 C6orf89Q6UWU4 347 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CCDC91Q7Z6B0 441 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CPLX4Q7Z7G2 160 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 JAMLQ86YT9 394 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 ZFPM1Q8IX07 1006 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 RIBC1Q8N443 379 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 MCPH1Q8NEM0 835 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 LMO3Q8TAP4 145 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 PIGOQ8TEQ8 1089 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CYFIP2Q96F07 1278 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 VCPIP1Q96JH7 1222 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CDHR1Q96JP9 859 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 NT5C1BQ96P26 610 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 SENP7Q9BQF6 1050 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 CCDC77Q9BR77 488 aa7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 NTPCRQ9BSD7 190 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-215ENST00000557370 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms