RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TGFB3P10600 412 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ANXA11P50995 505 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 CREMQ03060 361 aa8.82□□□□□ -1
CHD8-213ENST00000557364 POLD3Q15054 466 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 RABGAP1LQ5R372 815 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MMS22LQ6ZRQ5 1243 aa8.82□□□□□ -1
CHD8-213ENST00000557364 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.82□□□□□ -13e-8■■■□□ 17.4
CHD8-213ENST00000557364 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
CHD8-213ENST00000557364 POLR3CQ9BUI4 534 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 UBQLN1Q9UMX0 589 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 POTEFA5A3E0 1075 aa8.82□□□□□ -1
CHD8-213ENST00000557364 FGGP02679 453 aa8.82□□□□□ -1
CHD8-213ENST00000557364 POTEIP0CG38 1075 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ATF7IP2Q5U623 682 aa8.82□□□□□ -1
CHD8-213ENST00000557364 POTEGQ6S5H5 508 aa8.82□□□□□ -1
CHD8-213ENST00000557364 POTEEQ6S8J3 1075 aa8.82□□□□□ -1
CHD8-213ENST00000557364 NCLNQ969V3 563 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MRPL9Q9BYD2 267 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 LRRC7Q96NW7 1537 aa8.82□□□□□ -1
CHD8-213ENST00000557364 INO80Q9ULG1 1556 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 TAF6P49848 677 aa8.82□□□□□ -1
CHD8-213ENST00000557364 NCKAP1LP55160 1127 aa8.82□□□□□ -1
CHD8-213ENST00000557364 DHX34Q14147 1143 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 RCN2Q14257 317 aa8.82□□□□□ -1
CHD8-213ENST00000557364 EDRF1Q3B7T1 1238 aa8.82□□□□□ -1
CHD8-213ENST00000557364 YME1L1Q96TA2 773 aa8.82□□□□□ -1
CHD8-213ENST00000557364 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MYO3AQ8NEV4 1616 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ICAM1P05362 532 aa8.82□□□□□ -1
CHD8-213ENST00000557364 FOXO4P98177 505 aa8.82□□□□□ -1
CHD8-213ENST00000557364 IL1RL1Q01638 556 aa8.82□□□□□ -1
CHD8-213ENST00000557364 GRIN1Q05586 938 aa8.82□□□□□ -1
CHD8-213ENST00000557364 CAPRIN1Q14444 709 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 PDK1Q15118 436 aa8.82□□□□□ -1
CHD8-213ENST00000557364 E4F1Q66K89 784 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 LINC00523Q86TU6 105 aa8.82□□□□□ -1
CHD8-213ENST00000557364 SUDS3Q9H7L9 328 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 ENTPD7Q9NQZ7 604 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
CHD8-213ENST00000557364 BAIAP2L1Q9UHR4 511 aa8.82□□□□□ -1
CHD8-213ENST00000557364 PITPNM2Q9BZ72 1349 aa8.82□□□□□ -1
CHD8-213ENST00000557364 PPRC1Q5VV67 1664 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 MFAP3LO75121 409 aa8.82□□□□□ -1
CHD8-213ENST00000557364 SUPT3HO75486 399 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ASMTLO95671 621 aa8.82□□□□□ -1
CHD8-213ENST00000557364 DPEP1P16444 411 aa8.82□□□□□ -1
CHD8-213ENST00000557364 PPP4CP60510 307 aa8.82□□□□□ -1
CHD8-213ENST00000557364 WDR72Q3MJ13 1102 aa8.82□□□□□ -1
CHD8-213ENST00000557364 HP1BP3Q5SSJ5 553 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 TBC1D10CQ8IV04 446 aa8.82□□□□□ -1
CHD8-213ENST00000557364 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
CHD8-213ENST00000557364 PRR12Q9ULL5 1215 aa8.82□□□□□ -1
CHD8-213ENST00000557364 SNAP25P60880 206 aa8.82□□□□□ -1
CHD8-213ENST00000557364 CDC42EP5Q6NZY7 148 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MOXD1Q6UVY6 613 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
CHD8-213ENST00000557364 FAM9CQ8IZT9 166 aa8.82□□□□□ -1
CHD8-213ENST00000557364 ANKRD13CQ8N6S4 541 aa8.82□□□□□ -1
CHD8-213ENST00000557364 RFFLQ8WZ73 363 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MXRA8Q9BRK3 442 aa8.82□□□□□ -1
CHD8-213ENST00000557364 MRFAP1Q9Y605 127 aa8.82□□□□□ -1
CHD8-213ENST00000557364 SLC30A1Q9Y6M5 507 aa8.82□□□□□ -1
CHD8-213ENST00000557364 GPR75-ASB3A0A0A6YYF3 556 aa8.81□□□□□ -1
CHD8-213ENST00000557364 DFFAO00273 331 aa8.81□□□□□ -1
CHD8-213ENST00000557364 CABYRO75952 493 aa8.81□□□□□ -1
CHD8-213ENST00000557364 FAM200BP0CF97 657 aa8.81□□□□□ -1
CHD8-213ENST00000557364 CLNS1AP54105 237 aaKnown RBP8.81□□□□□ -1
CHD8-213ENST00000557364 TTLL9Q3SXZ7 439 aa8.81□□□□□ -1
CHD8-213ENST00000557364 AARS2Q5JTZ9 985 aaKnown RBP8.81□□□□□ -1
CHD8-213ENST00000557364 SMYD4Q8IYR2 804 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 DNERQ8NFT8 737 aa8.81□□□□□ -1
CHD8-213ENST00000557364 AGAP1Q9UPQ3 857 aa8.81□□□□□ -1
CHD8-213ENST00000557364 PRPF4O43172 522 aaKnown RBP eCLIP8.81□□□□□ -1
CHD8-213ENST00000557364 EXTL3O43909 919 aa8.81□□□□□ -1
CHD8-213ENST00000557364 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -18e-6■■■■■ 52.4
CHD8-213ENST00000557364 CDH6P55285 790 aa8.81□□□□□ -1
CHD8-213ENST00000557364 TAB3Q8N5C8 712 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 STK33Q9BYT3 514 aa8.81□□□□□ -1
CHD8-213ENST00000557364 AIPL1Q9NZN9 384 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SULT1E1P49888 294 aa8.81□□□□□ -1
CHD8-213ENST00000557364 NCOA4Q13772 614 aa8.81□□□□□ -1
CHD8-213ENST00000557364 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
CHD8-213ENST00000557364 C9orf131Q5VYM1 1079 aa8.81□□□□□ -1
CHD8-213ENST00000557364 TRIM48Q8IWZ4 208 aa8.81□□□□□ -1
CHD8-213ENST00000557364 C11orf70Q9BRQ4 267 aa8.81□□□□□ -1
CHD8-213ENST00000557364 FRMD8P1Q9BZ68 369 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 KRT82Q9NSB4 513 aa8.81□□□□□ -1
CHD8-213ENST00000557364 PNPLA6Q8IY17 1366 aa8.81□□□□□ -1
CHD8-213ENST00000557364 CTIFO43310 598 aaKnown RBP8.81□□□□□ -1
CHD8-213ENST00000557364 KCNQ2O43526 872 aa8.81□□□□□ -1
CHD8-213ENST00000557364 OR1G1P47890 313 aa8.81□□□□□ -1
CHD8-213ENST00000557364 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 NFE2Q16621 373 aaPredicted RBP8.81□□□□□ -1
CHD8-213ENST00000557364 ZNF394Q53GI3 561 aa8.81□□□□□ -1
CHD8-213ENST00000557364 IRAK1BP1Q5VVH5 260 aa8.81□□□□□ -1
CHD8-213ENST00000557364 PRUNE1Q86TP1 453 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SNF8Q96H20 258 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SIK2Q9H0K1 926 aa8.81□□□□□ -1
CHD8-213ENST00000557364 SAYSD1Q9NPB0 183 aa8.81□□□□□ -1
CHD8-213ENST00000557364 EMSYQ7Z589 1322 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms