RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ZFP14Q9HCL3 533 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 KLK14Q9P0G3 267 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.28□□□□□ -0.6
RDH11-210ENST00000557331 MYH15Q9Y2K3 1946 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 PHLPP2Q6ZVD8 1323 aa11.28□□□□□ -0.6
RDH11-210ENST00000557331 ARHGEF37A1IGU5 675 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 CASTOR2A6NHX0 329 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 ACKR2O00590 384 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 B3GAT3O94766 335 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 KIF4AO95239 1232 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 RETP07949 1114 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 TOB2Q14106 344 aaPredicted RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 CALCRLQ16602 461 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 ITFG1Q8TB96 612 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 NACC1Q96RE7 527 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 KXD1Q9BQD3 176 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 TRMT61BQ9BVS5 477 aaKnown RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 POLR3FQ9H1D9 316 aaPredicted RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
RDH11-210ENST00000557331 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 DNMT3BQ9UBC3 853 aaKnown RBP11.27□□□□□ -0.61
RDH11-210ENST00000557331 H7C4K7 107 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 SYN3O14994 580 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 ZBTB39O15060 712 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 B4GALT5O43286 388 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 LRRN2O75325 713 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 RECQL4O94761 1208 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 RHOP08100 348 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 ADRB1P08588 477 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 ATP2B1P20020 1258 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 MUTP22033 750 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
RDH11-210ENST00000557331 NTHL1P78549 312 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 MTAPQ13126 283 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 IQCEQ6IPM2 695 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 TCEAL8Q8IYN2 117 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
RDH11-210ENST00000557331 TUFT1Q9NNX1 390 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 TOPORSQ9NS56 1045 aaPredicted RBP11.26□□□□□ -0.61
RDH11-210ENST00000557331 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 MTF2Q9Y483 593 aaPredicted RBP11.26□□□□□ -0.61
RDH11-210ENST00000557331 CDY1Q9Y6F8 540 aa11.26□□□□□ -0.61
RDH11-210ENST00000557331 PRRG1O14668 218 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 PTGESO14684 152 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 SLC30A4O14863 429 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 ABLIM3O94929 683 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 ATF2P15336 505 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 PSMC3P17980 439 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
RDH11-210ENST00000557331 KRT2P35908 639 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 NAMPTP43490 491 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 CXCL12P48061 93 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
RDH11-210ENST00000557331 LRRC32Q14392 662 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 NAB2Q15742 525 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 UPP1Q16831 310 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 SMARCD2Q92925 531 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 IFT74Q96LB3 600 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 PAAF1Q9BRP4 392 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 PDZD7Q9H5P4 517 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
RDH11-210ENST00000557331 FAM208BQ5VWN6 2430 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 PATJQ8NI35 1801 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 NEMFO60524 1076 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 PAPSS2O95340 614 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 PRKCBP05771 671 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 CD72P21854 359 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 TGM1P22735 817 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 FZD5Q13467 585 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 CSRP2Q16527 193 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 TANGO2Q6ICL3 276 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 PDZD4Q76G19 769 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 DEPTORQ8TB45 409 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 HASPINQ8TF76 798 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 FAM3CQ92520 227 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 ZNF512Q96ME7 567 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
RDH11-210ENST00000557331 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 HEBP1Q9NRV9 189 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 PDRG1Q9NUG6 133 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms