RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 NOLC1Q14978 699 aaKnown RBP eCLIP24.8■■□□□ 1.56
TMEM260-214ENST00000556975 CCDC149Q6ZUS6 474 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 RASSF8Q8NHQ8 419 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 LARP4BQ92615 738 aaKnown RBP24.8■■□□□ 1.56
TMEM260-214ENST00000556975 SNX21Q969T3 373 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 EPSTI1Q96J88 318 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 MFSD14AQ96MC6 490 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 ZMAT2Q96NC0 199 aaKnown RBP24.8■■□□□ 1.56
TMEM260-214ENST00000556975 CLSTN3Q9BQT9 956 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 ZSCAN16Q9H4T2 348 aaPredicted RBP24.8■■□□□ 1.56
TMEM260-214ENST00000556975 PARVGQ9HBI0 331 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 ZDHHC7Q9NXF8 308 aa24.8■■□□□ 1.56
TMEM260-214ENST00000556975 VWA8A3KMH1 1905 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 CLDN3O15551 220 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 IGFBP6P24592 240 aaPredicted RBP24.79■■□□□ 1.56
TMEM260-214ENST00000556975 MARCKSP29966 332 aaPredicted RBP24.79■■□□□ 1.56
TMEM260-214ENST00000556975 SOX4Q06945 474 aaPredicted RBP24.79■■□□□ 1.56
TMEM260-214ENST00000556975 PSMD5Q16401 504 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 FAM173BQ6P4H8 233 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 USP49Q70CQ1 688 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 CEP57Q86XR8 500 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 ACSF2Q96CM8 615 aaPredicted RBP24.79■■□□□ 1.56
TMEM260-214ENST00000556975 GOLGA2P5Q9HBQ8 144 aa24.79■■□□□ 1.56
TMEM260-214ENST00000556975 WDFY4Q6ZS81 3184 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 MEFVO15553 781 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-214ENST00000556975 TRAPPC3O43617 180 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 STX6O43752 255 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 RFPL2O75678 378 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 FAM13AO94988 1023 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 SPATA31D3P0C874 917 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 SLC10A6Q3KNW5 377 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 SPATA31D4Q6ZUB0 917 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 OTOP3Q7RTS5 596 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 GLYCTKQ8IVS8 523 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 MYCT1Q8N699 235 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 KREMEN2Q8NCW0 462 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 C3orf58Q8NDZ4 430 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 ZNF707Q96C28 371 aaPredicted RBP24.78■■□□□ 1.56
TMEM260-214ENST00000556975 WDR6Q9NNW5 1121 aaKnown RBP24.78■■□□□ 1.56
TMEM260-214ENST00000556975 ANKFY1Q9P2R3 1169 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 SORCS3Q9UPU3 1222 aa24.78■■□□□ 1.56
TMEM260-214ENST00000556975 TRAK2O60296 914 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 PIGRP01833 764 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 RPL9P32969 192 aaKnown RBP24.77■■□□□ 1.56
TMEM260-214ENST00000556975 UBALD2Q8IYN6 164 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 ASIC4Q96FT7 647 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 FIZ1Q96SL8 496 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 HAPLN2Q9GZV7 340 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 KCNH6Q9H252 994 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 PLEKHA5Q9HAU0 1116 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 STK17AQ9UEE5 414 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 CCDC39Q9UFE4 941 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 LIMD1Q9UGP4 676 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 FBXW11Q9UKB1 542 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 TBX20Q9UMR3 447 aa24.77■■□□□ 1.56
TMEM260-214ENST00000556975 ZMYND10O75800 440 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 KRT18P05783 430 aaKnown RBP24.76■■□□□ 1.55
TMEM260-214ENST00000556975 HARSP12081 509 aaKnown RBP24.76■■□□□ 1.55
TMEM260-214ENST00000556975 ABCD1P33897 745 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 SLC39A14Q15043 492 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 SPECC1Q5M775 1068 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 SMG7Q92540 1137 aaKnown RBP24.76■■□□□ 1.55
TMEM260-214ENST00000556975 PBXIP1Q96AQ6 731 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 USP28Q96RU2 1077 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 PRKD2Q9BZL6 878 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 FOXD4L1Q9NU39 408 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 MTRRQ9UBK8 725 aa24.76■■□□□ 1.55
TMEM260-214ENST00000556975 CLTAP09496 248 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 MYBP10242 640 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 GTF2BQ00403 316 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 MTMR3Q13615 1198 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 RAB33AQ14088 237 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 KYAT1Q16773 422 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 BICD1Q96G01 975 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 CLIC6Q96NY7 704 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 BACE2Q9Y5Z0 518 aa24.75■■□□□ 1.55
TMEM260-214ENST00000556975 K7ENM7 598 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 PODXLO00592 558 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 ADAM12O43184 909 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 BRCC3P46736 316 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 LIG4P49917 911 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 CEBPZQ03701 1054 aaKnown RBP24.74■■□□□ 1.55
TMEM260-214ENST00000556975 SEZ6Q53EL9 994 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 ANKS3Q6ZW76 656 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 STAMQ92783 540 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 ST6GALNAC4Q9H4F1 302 aa24.74■■□□□ 1.55
TMEM260-214ENST00000556975 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.74■■□□□ 1.55
TMEM260-214ENST00000556975 PDCD11Q14690 1871 aaKnown RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 CLUHO75153 1309 aa24.73■■□□□ 1.55
TMEM260-214ENST00000556975 TTC26A0AVF1 554 aa24.73■■□□□ 1.55
TMEM260-214ENST00000556975 TBCAO75347 108 aaKnown RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 TKTP29401 623 aaKnown RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 TXLNAP40222 546 aa24.73■■□□□ 1.55
TMEM260-214ENST00000556975 NASPP49321 788 aaPredicted RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 RRAGBQ5VZM2 374 aa24.73■■□□□ 1.55
TMEM260-214ENST00000556975 ALYREFQ86V81 257 aaKnown RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 KRI1Q8N9T8 703 aaKnown RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 C18orf25Q96B23 403 aaPredicted RBP24.73■■□□□ 1.55
TMEM260-214ENST00000556975 HNRNPDLO14979 420 aaKnown RBP24.72■■□□□ 1.55
TMEM260-214ENST00000556975 FAM189A1O60320 539 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms