RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 ITGB1P05556 798 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 CDKN1CP49918 316 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 LY6G5CQ5SRR4 150 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 IQSEC1Q6DN90 963 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 FTSJ3Q8IY81 847 aaKnown RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 VOPP1Q96AW1 172 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 SYNPO2Q9UMS6 1093 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 PCDHB6Q9Y5E3 794 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 DDX49Q9Y6V7 483 aaKnown RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 POLA1P09884 1462 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-213ENST00000556916 CFAP74Q9C0B2 1584 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 SHPRHQ149N8 1683 aa4.48□□□□□ -1.69
FOXN3-213ENST00000556916 PIK3C2GO75747 1445 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 CLTCL1P53675 1640 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 GOLGA8AA7E2F4 631 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 ULK1O75385 1050 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 SCAF4O95104 1147 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 NUDT3O95989 172 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 CFBP00751 764 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 LMNAP02545 664 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 ZFP36P26651 326 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 LGALS4P56470 323 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 SESN3P58005 492 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 CCT2P78371 535 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 CBX1P83916 185 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 GABPB1Q06547 395 aaPredicted RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 PPARAQ07869 468 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 PTPAQ15257 358 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 RNF187Q5TA31 235 aaPredicted RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 FAM177A1Q8N128 213 aaPredicted RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 MSL3Q8N5Y2 521 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 LMBR1Q8WVP7 490 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 GAB3Q8WWW8 586 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 GPATCH3Q96I76 525 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 QRSL1Q9H0R6 528 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 KCTD10Q9H3F6 313 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 CHMP4BQ9H444 224 aaKnown RBP4.47□□□□□ -1.69
FOXN3-213ENST00000556916 C14orf119Q9NWQ9 140 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 ING3Q9NXR8 418 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 PRSS50Q9UI38 385 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 ATP8A1Q9Y2Q0 1164 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 HS3ST4Q9Y661 456 aa4.47□□□□□ -1.69
FOXN3-213ENST00000556916 ASXL1Q8IXJ9 1541 aa4.46□□□□□ -1.69
FOXN3-213ENST00000556916 KIAA1210Q9ULL0 1709 aa4.46□□□□□ -1.69
FOXN3-213ENST00000556916 UHRF1BP1LA0JNW5 1464 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 NRP1O14786 923 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 TRIM24O15164 1050 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 MAFGO15525 162 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 BCAR3O75815 825 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 ALDH1A2O94788 518 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 RHOBTB3O94955 611 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 FSBPO95073 299 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 LY86O95711 162 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 GAAP10253 952 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 GYPEP15421 78 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 GPR3P46089 330 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 FAM193AP78312 1265 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 NUCB2P80303 420 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 SLC20A2Q08357 652 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 MGAT5Q09328 741 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 CC2D1BQ5T0F9 858 aaKnown RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 ZNF771Q7L3S4 317 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 SPATS2Q86XZ4 545 aaKnown RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 PDCL2Q8N4E4 241 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 CDYL2Q8N8U2 506 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 PPP1R14CQ8TAE6 165 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 HIST1H2AHQ96KK5 128 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 FAM193BQ96PV7 902 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 HIST1H2AJQ99878 128 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 OSBPL6Q9BZF3 934 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 TSPYL1Q9H0U9 437 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 CCDC8Q9H0W5 538 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 EPC1Q9H2F5 836 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 ZNF768Q9H5H4 540 aaKnown RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 DIAPH3Q9NSV4 1193 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 EIF2B4Q9UI10 523 aaKnown RBP4.46□□□□□ -1.7
FOXN3-213ENST00000556916 PACSIN3Q9UKS6 424 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 KIF3AQ9Y496 699 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 TNFRSF18Q9Y5U5 241 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 NUMBLQ9Y6R0 609 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 SPHKAPQ2M3C7 1700 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 RAPGEF6Q8TEU7 1601 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 ERBINQ96RT1 1412 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 YEATS2Q9ULM3 1422 aa4.46□□□□□ -1.7
FOXN3-213ENST00000556916 GRIN2AQ12879 1464 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 RECQL4O94761 1208 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 SEC24DO94855 1032 aaPredicted RBP4.45□□□□□ -1.7
FOXN3-213ENST00000556916 BAG4O95429 457 aaKnown RBP4.45□□□□□ -1.7
FOXN3-213ENST00000556916 PTMAP06454 111 aaKnown RBP4.45□□□□□ -1.7
FOXN3-213ENST00000556916 FBLP22087 321 aaKnown RBP4.45□□□□□ -1.7
FOXN3-213ENST00000556916 PPP2R1AP30153 589 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 CASRP41180 1078 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 ERVK-21P61565 698 aa4.45□□□□□ -1.7
FOXN3-213ENST00000556916 TMF1P82094 1093 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms