RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ZFP42Q96MM3 310 aa8.47□□□□□ -1.05
HNRNPC-226ENST00000556628 NT5C3AQ9H0P0 336 aa8.47□□□□□ -1.05
HNRNPC-226ENST00000556628 POMKQ9H5K3 350 aa8.47□□□□□ -1.05
HNRNPC-226ENST00000556628 SFXN1Q9H9B4 322 aa8.47□□□□□ -1.05
HNRNPC-226ENST00000556628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.47□□□□□ -1.053e-6■□□□□ 9.1
HNRNPC-226ENST00000556628 MIOSQ9NXC5 875 aa8.47□□□□□ -1.05
HNRNPC-226ENST00000556628 CCDC169A6NNP5 214 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 CNPP09543 421 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 CLCN4P51793 760 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 PEX3P56589 373 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 ZXDAP98168 799 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 CREMQ03060 361 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 DMP1Q13316 513 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 TUSC3Q13454 348 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 ECM1Q16610 540 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 PTPN21Q16825 1174 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 USP41Q3LFD5 358 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 ATF7IP2Q5U623 682 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 LARP1BQ659C4 914 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 C12orf76Q8N812 135 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 TDRD5Q8NAT2 981 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 SLC22A17Q8WUG5 538 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 BSNDQ8WZ55 320 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 ACSF2Q96CM8 615 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 TIPINQ9BVW5 301 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 VN1R3Q9BXE9 311 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 KCNH6Q9H252 994 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 PDZD7Q9H5P4 517 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 MARCH5Q9NX47 278 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 SNTG2Q9NY99 539 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 KCNG1Q9UIX4 513 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 ADAM28Q9UKQ2 775 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 SF3B1O75533 1304 aaKnown RBP eCLIP8.46□□□□□ -1.065e-6■■■■■ 59.2
HNRNPC-226ENST00000556628 MYH11P35749 1972 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
HNRNPC-226ENST00000556628 PLXNA3P51805 1871 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TMEM221A6NGB7 291 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 PP2D1A8MPX8 630 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 J3QL48 77 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 M0R296 226 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 HIP1RO75146 1068 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 AP1G2O75843 785 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 RECQL4O94761 1208 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 BMP15O95972 392 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 GLUD1P00367 558 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 WEE2P0C1S8 567 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CDC25AP30304 524 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 SMTNP53814 917 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 YARSP54577 528 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 ATP2C1P98194 919 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 DSG1Q02413 1049 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 SIGLEC14Q08ET2 396 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 HSP90AA2PQ14568 343 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 ARL6IP4Q66PJ3 421 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 RINT1Q6NUQ1 792 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TMC5Q6UXY8 1006 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CYP26C1Q6V0L0 522 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 C15orf39Q6ZRI6 1047 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CCDC149Q6ZUS6 474 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TAS1R1Q7RTX1 841 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 BMP8AQ7Z5Y6 402 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 GPR149Q86SP6 731 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 GPR65Q8IYL9 337 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 HDAC7Q8WUI4 952 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 PBXIP1Q96AQ6 731 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CCDC94Q9BW85 323 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 MRPL4Q9BYD3 311 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CCDC113Q9H0I3 377 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 C17orf75Q9HAS0 396 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 PIDD1Q9HB75 910 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 POLD4Q9HCU8 107 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 KMT5AQ9NQR1 393 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 MAN1C1Q9NR34 630 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TOPORSQ9NS56 1045 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 SORCS3Q9UPU3 1222 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 TNFSF13BQ9Y275 285 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 USTQ9Y2C2 406 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 GDAQ9Y2T3 454 aa8.45□□□□□ -1.06
HNRNPC-226ENST00000556628 CCDC195A0A1B0GUA6 201 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 CASTOR2A6NHX0 329 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 C2CD4DB7Z1M9 353 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 TEX28O15482 410 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 C1RP00736 705 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 SNRPBP14678 240 aaKnown RBP8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 NPTX2P47972 431 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 ELAVL2Q12926 359 aaKnown RBP8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 STRN3Q13033 797 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 ZNF568Q3ZCX4 644 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 KIAA0319Q5VV43 1072 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 EEF1DP3Q658K8 133 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
HNRNPC-226ENST00000556628 PDXDC1Q6P996 788 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms