RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 FOXQ1Q9C009 403 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 NAPBQ9H115 298 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 STRIP2Q9ULQ0 834 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 EFR3BQ9Y2G0 817 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-239ENST00000556315 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
ATXN3-239ENST00000556315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 C17orf102A2RUQ5 167 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 M0R2C6 588 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 LINC01565O15544 149 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 RANBP6O60518 1105 aaKnown RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 NMT2O60551 498 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TBX10O75333 385 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ATE1O95260 518 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 HTR3BO95264 441 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 MMP1P03956 469 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ATF4P18848 351 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ICAM3P32942 547 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 NBL1P41271 181 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ID4P47928 161 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 SOX9P48436 509 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 RRP1P56182 461 aaKnown RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 MLANAQ16655 118 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TMEM201Q5SNT2 666 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 KCNV1Q6PIU1 500 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 HID1Q8IV36 788 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 SIRT2Q8IXJ6 389 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 SYTL5Q8TDW5 730 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 ATP6V0A1Q93050 837 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 RIPOR3Q96MK2 946 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 FERD3LQ96RJ6 166 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TMEM47Q9BQJ4 181 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 EHMT1Q9H9B1 1298 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 TCP11L1Q9NUJ3 509 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 C19orf73Q9NVV2 129 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-239ENST00000556315 PCDHB14Q9Y5E9 798 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 MRVI1Q9Y6F6 885 aa5.62□□□□□ -1.51
ATXN3-239ENST00000556315 PRR23AA6NEV1 266 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 ENPP3O14638 875 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 GLI1P08151 1106 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 FGRP09769 529 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 ZNF286BP0CG31 522 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 TGFB3P10600 412 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 GNAT1P11488 350 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 ATF7P17544 494 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 DNAJA1P31689 397 aaKnown RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 CAMK1Q14012 370 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 BTG3Q14201 252 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 SLBPQ14493 270 aaKnown RBP eCLIP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 CELF3Q5SZQ8 465 aaKnown RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 ARHGEF16Q5VV41 709 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 SLC6A19Q695T7 634 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 RASGRP2Q7LDG7 609 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 PANK1Q8TE04 598 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 TBC1D5Q92609 795 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 P2RX5Q93086 422 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 NKD2Q969F2 451 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 LIN37Q96GY3 246 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 HSPA12BQ96MM6 686 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 SPATA33Q96N06 139 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 TTC14Q96N46 770 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 FBRSQ9HAH7 460 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 REV1Q9UBZ9 1251 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-239ENST00000556315 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
ATXN3-239ENST00000556315 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 REV3LO60673 3130 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ORC4O43929 436 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 TSPAN15O95858 294 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SSBP05455 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SNHG28P0DPA3 235 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 PDHBP11177 359 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 HOXC8P31273 242 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 NRIP1P48552 1158 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms