RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 FOXQ1Q9C009 403 aa10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 LMAN2LQ9H0V9 348 aa10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 PLAGL2Q9UPG8 496 aa10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 SLC5A6Q9Y289 635 aa10.28□□□□□ -0.76
GTF2A1-204ENST00000556268 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 MBLAC1A4D2B0 266 aaPredicted RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 IFIT3O14879 490 aaKnown RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 GRM6O15303 877 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 DCXO43602 365 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 ATP9AO75110 1047 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 SLITRK5O94991 958 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 CYP21A2P08686 494 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 PTH1RQ03431 593 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 MGAT3Q09327 533 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 TRDNQ13061 729 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 MARCH8Q5T0T0 291 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 TAF2Q6P1X5 1199 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 BNC2Q6ZN30 1099 aaPredicted RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 RTN4RL1Q86UN2 441 aaPredicted RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 HOMER1Q86YM7 354 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 ADHFE1Q8IWW8 467 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 GIMAP8Q8ND71 665 aaPredicted RBP10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 LMBR1Q8WVP7 490 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 MISP3Q96FF7 219 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 MIPEPQ99797 713 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 ADGRE2Q9UHX3 823 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 FAM50BQ9Y247 325 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 SIP14410 1827 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 COL4A6Q14031 1691 aa10.27□□□□□ -0.77
GTF2A1-204ENST00000556268 COL4A4P53420 1690 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 DGKIO75912 1065 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 PF4P02776 101 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 KCNA2P16389 499 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 LMNB2Q03252 620 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 HYAL1Q12794 435 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 BNIP3Q12983 259 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 ADAM15Q13444 863 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 CAMK2GQ13555 558 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 LPIN1Q14693 890 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 PRAMEF13Q5VWM6 474 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 RUFY4Q6ZNE9 571 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 SEPT1Q8WYJ6 367 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 RWDD3Q9Y3V2 267 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 SUPT16HQ9Y5B9 1047 aaKnown RBP10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 TAF6LQ9Y6J9 622 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 SQORQ9Y6N5 450 aa10.26□□□□□ -0.77
GTF2A1-204ENST00000556268 MYH6P13533 1939 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 TTC3P53804 2025 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 E7EWF7 191 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 MAFGO15525 162 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 EYA4O95677 639 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 PGRP06401 933 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 ITGB5P18084 799 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 GBP2P32456 591 aaPredicted RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 ANTXR2P58335 489 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 MRPL58Q14197 206 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 WTAPQ15007 396 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 HERC4Q5GLZ8 1057 aaPredicted RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 FBXO47Q5MNV8 452 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 UTP14CQ5TAP6 766 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 NCOA7Q8NI08 942 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 MAP4K1Q92918 833 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 P2RX5Q93086 422 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 CDHR1Q96JP9 859 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 TMEM74Q96NL1 305 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 LZTS2Q9BRK4 669 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 MTA3Q9BTC8 594 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 C11orf84Q9BUA3 381 aaPredicted RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 UPF3BQ9BZI7 483 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 AGO3Q9H9G7 860 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 CLDND1Q9NY35 253 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 UBIAD1Q9Y5Z9 338 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 TRIOO75962 3097 aa10.25□□□□□ -0.77
GTF2A1-204ENST00000556268 ERICH2A1L162 156 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 MBTPS2O43462 519 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 RPLP2P05387 115 aaKnown RBP10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 GSPT1P15170 499 aaKnown RBP10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 CHMLP26374 656 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 TCF7P36402 384 aaPredicted RBP10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 CD96P40200 585 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 BMP8AQ7Z5Y6 402 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 RSPH3Q86UC2 560 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 RELL1Q8IUW5 271 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 MB21D2Q8IYB1 491 aaPredicted RBP10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 MFSD2AQ8NA29 543 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 AGBL5Q8NDL9 886 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 SPPL3Q8TCT6 385 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms