RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 RHOBTB2Q9BYZ6 727 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 SLKQ9H2G2 1235 aaPredicted RBP6.49□□□□□ -1.37
PRKCH-220ENST00000556164 MINDY3Q9H8M7 445 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 UBN1Q9NPG3 1134 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKCH-220ENST00000556164 SIRPGQ9P1W8 387 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 NUMBLQ9Y6R0 609 aa6.49□□□□□ -1.37
PRKCH-220ENST00000556164 CEP250Q9BV73 2442 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NID2Q14112 1375 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ZNF292O60281 2723 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ARL5CA6NH57 179 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ESPNB1AK53 854 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ANHXE9PGG2 379 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 F8W810 466 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 EML1O00423 815 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 TGM5O43548 720 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 KINO60870 393 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 LRRN2O75325 713 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NR1I2O75469 434 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NUDT7P0C024 238 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 GLULP15104 373 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 RPL17P18621 184 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 FSHRP23945 695 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 HOXA11P31270 313 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 SCNN1GP51170 649 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 CCT2P78371 535 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 DSG1Q02413 1049 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 DSC1Q08554 894 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 LAMTOR4Q0VGL1 99 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NTRK3Q16288 839 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 RSPO4Q2I0M5 234 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 KMT5BQ4FZB7 885 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ARSHQ5FYA8 562 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 FUT10Q6P4F1 479 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NOTUMQ6P988 496 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 BLOC1S2Q6QNY1 142 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 B3GNT9Q6UX72 402 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 RNF168Q8IYW5 571 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 RNF149Q8NC42 400 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 TSEN2Q8NCE0 465 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 SMG8Q8ND04 991 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 CNNM3Q8NE01 707 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ETNPPLQ8TBG4 499 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 HDAC7Q8WUI4 952 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 PRPF31Q8WWY3 499 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 TMEM143Q96AN5 459 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 CPB2Q96IY4 423 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 CEP170P1Q96L14 293 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ZFP42Q96MM3 310 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 JAKMIP1Q96N16 626 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 GAD1Q99259 594 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 USB1Q9BQ65 265 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 EIF2AQ9BY44 585 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 C22orf23Q9BZE7 217 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NT5C3AQ9H0P0 336 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 PLEKHA4Q9H4M7 779 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 RXFP1Q9HBX9 757 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NCOA5Q9HCD5 579 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 SH3GLB2Q9NR46 395 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 SLC2A4RGQ9NR83 387 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 SPATA6Q9NWH7 488 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 DLGAP2Q9P1A6 1054 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NCDNQ9UBB6 729 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 DDX25Q9UHL0 483 aaKnown RBP6.48□□□□□ -1.37
PRKCH-220ENST00000556164 HES2Q9Y543 173 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 IPPQ9Y573 584 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 PCDHGB7Q9Y5F8 929 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 NOTCH4Q99466 2003 aa6.48□□□□□ -1.37
PRKCH-220ENST00000556164 CYP3A7-CYP3A51PA0A087WV96 503 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 INO80B-WBP1J3KQ70 363 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 LAMTOR5O43504 91 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 SLC37A4O43826 429 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 CREB3O43889 395 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 TSPAN1O60635 241 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 DKC1O60832 514 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRKCH-220ENST00000556164 IFNAR1P17181 557 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 CYP3A7P24462 503 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 TBX4P57082 545 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 CREMQ03060 361 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
PRKCH-220ENST00000556164 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
PRKCH-220ENST00000556164 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 EMC2Q15006 297 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 INF2Q27J81 1249 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 USP41Q3LFD5 358 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 C16orf46Q6P387 395 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 MOXD1Q6UVY6 613 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 PARM1Q6UWI2 310 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 GRASPQ7Z6J2 395 aaPredicted RBP6.47□□□□□ -1.37
PRKCH-220ENST00000556164 FERMT3Q86UX7 667 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 HACE1Q8IYU2 909 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 BLIDQ8IZY5 108 aa6.47□□□□□ -1.37
PRKCH-220ENST00000556164 SUMF1Q8NBK3 374 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms