RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNFX1Q9P2E3 1918 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 DENND3A2RUS2 1198 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 RASGRF2O14827 1237 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 DKC1O60832 514 aaKnown RBP eCLIP7.49□□□□□ -1.21
TDP1-213ENST00000555880 GAS8O95995 478 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SHBGP04278 402 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 MYBL1P10243 752 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 MYCLP12524 364 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 CHN1P15882 459 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 ATP5DP30049 168 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ABCD1P33897 745 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 MMP13P45452 471 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 FMO1Q01740 532 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 GHRHRQ02643 423 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PPARDQ03181 441 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SGO2Q562F6 1265 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ACAD10Q6JQN1 1059 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 TTC27Q6P3X3 843 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SYDE1Q6ZW31 735 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 TAX1BP1Q86VP1 789 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CBWD2Q8IUF1 395 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CCDC197Q8NCU1 140 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 RDM1Q8NG50 284 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 MDM1Q8TC05 714 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PLEKHO2Q8TD55 490 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SYTL5Q8TDW5 730 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 GRK7Q8WTQ7 553 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 POMGNT1Q8WZA1 660 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 KAT5Q92993 513 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ART4Q93070 314 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SAAL1Q96ER3 474 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C17orf75Q9HAS0 396 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 GPRC5CQ9NQ84 441 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 HOMER3Q9NSC5 361 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 INTS9Q9NV88 658 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 SAMD15Q9P1V8 674 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 WHRNQ9P202 907 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 COQ4Q9Y3A0 265 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ZNF536O15090 1300 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ASTN2O75129 1339 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 C3orf80F5H4A9 247 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 H0YCG3 227 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 SMAPO00193 183 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 HNRNPDLO14979 420 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 RIPK2O43353 540 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 ZC3H11AO75152 810 aaKnown RBP eCLIP7.48□□□□□ -1.21
TDP1-213ENST00000555880 RARAP10276 462 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 DLATP10515 647 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 DRD4P21917 467 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 FGFR4P22455 802 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 CNGA1P29973 690 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 MAPK4P31152 587 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 RDXP35241 583 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 NPTX2P47972 431 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 BPIFB4P59827 614 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 TGFB2P61812 414 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 MRPS9P82933 396 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 GCNT1Q02742 428 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 CAV1Q03135 178 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 PGM5Q15124 567 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 QPCTQ16769 361 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 CLEC16AQ2KHT3 1053 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 TBC1D10BQ4KMP7 808 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 ANKRD20A8PQ5CZ79 823 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 ARHGEF16Q5VV41 709 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 XRRA1Q6P2D8 792 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 ILDR2Q71H61 639 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 TRMT1LQ7Z2T5 733 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 NLRX1Q86UT6 975 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 CCDC50Q8IVM0 306 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 NIM1KQ8IY84 436 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 TMEM161BQ8NDZ6 487 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 PARD3BQ8TEW8 1205 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 SPIRE2Q8WWL2 714 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 SLCO2A1Q92959 643 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 BICD1Q96G01 975 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 RMDN3Q96TC7 470 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 SH2D3AQ9BRG2 576 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 GLIS2Q9BZE0 524 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 ROPN1BQ9BZX4 212 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 CCDC113Q9H0I3 377 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 EPB41L4BQ9H329 900 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 SEMA4AQ9H3S1 761 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 LRRC19Q9H756 370 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 ROPN1Q9HAT0 212 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 RAVER2Q9HCJ3 691 aaKnown RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 RAB20Q9NX57 234 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 ASIC3Q9UHC3 531 aa7.48□□□□□ -1.21
TDP1-213ENST00000555880 CHORDC1Q9UHD1 332 aaPredicted RBP7.48□□□□□ -1.21
TDP1-213ENST00000555880 TESPA1A2RU30 521 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 TMEM150BA6NC51 233 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ANKRD63C9JTQ0 380 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms