RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 FAM84AQ96KN4 292 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 APOL6Q9BWW8 343 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 SIX2Q9NPC8 291 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.44□□□□□ -0.747e-9■■■■□ 23.8
HNRNPC-220ENST00000555585 RAB20Q9NX57 234 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 SNTG2Q9NY99 539 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 FHOD1Q9Y613 1164 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 LRRC53A6NM62 1247 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 PQBP1O60828 265 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 UCHL3P15374 230 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 CD52P31358 61 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 BFSP2Q13515 415 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 RAPGEF1Q13905 1077 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 LPIN1Q14693 890 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 DUOXA2Q1HG44 320 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 SLC10A6Q3KNW5 377 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 ZACNQ401N2 412 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 WDR44Q5JSH3 913 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 UBXN11Q5T124 520 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 TDRD10Q5VZ19 366 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 IQCEQ6IPM2 695 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 CD302Q8IX05 232 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 FAM126BQ8IXS8 530 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 OR5B17Q8NGF7 314 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 LMO3Q8TAP4 145 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 TAS1R2Q8TE23 839 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 BAP1Q92560 729 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 NT5C1BQ96P26 610 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 SPAG5Q96R06 1193 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 NAA15Q9BXJ9 866 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 AGO3Q9H9G7 860 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 ERVK-5Q9HDB9 667 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 UBE2TQ9NPD8 197 aaPredicted RBP10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 CHST12Q9NRB3 414 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 APEX2Q9UBZ4 518 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 PARP2Q9UGN5 583 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 PADI3Q9ULW8 664 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 CITO14578 2027 aa10.43□□□□□ -0.74
HNRNPC-220ENST00000555585 RALGAPA2Q2PPJ7 1873 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 RBAK-RBAKDNI3L0D1 243 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 LRRN2O75325 713 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 CD4P01730 458 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 IBSPP21815 317 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 GJA8P48165 433 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 TRPC3Q13507 836 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 ASIC2Q16515 512 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 SFMBT2Q5VUG0 894 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 DPY19L2P1Q6NXN4 242 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 CYP26C1Q6V0L0 522 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 C15orf39Q6ZRI6 1047 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 LRRC8DQ7L1W4 858 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 TRAPPC11Q7Z392 1133 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 TMTC1Q8IUR5 882 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 ARHGEF19Q8IW93 802 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 EFCAB13Q8IY85 973 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 HACE1Q8IYU2 909 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 PPM1KQ8N3J5 372 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 USP38Q8NB14 1042 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 PI4K2AQ9BTU6 479 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 OSBPL7Q9BZF2 842 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 MTMR12Q9C0I1 747 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 ASB7Q9H672 318 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 AJAP1Q9UKB5 411 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 R3HCC1Q9Y3T6 440 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 DAAM1Q9Y4D1 1078 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 HES2Q9Y543 173 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 IPPQ9Y573 584 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 SQORQ9Y6N5 450 aa10.42□□□□□ -0.74
HNRNPC-220ENST00000555585 DCDC2CA8MYV0 355 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ESPNB1AK53 854 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ARHGAP6O43182 974 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 RECQL4O94761 1208 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 VNN1O95497 513 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 NFICP08651 508 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 KRT19P08727 400 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ITGA4P13612 1032 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 SELPP16109 830 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 RFX1P22670 979 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 AKAP5P24588 427 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 STAT1P42224 750 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 MFAP3P55082 362 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ARID5AQ03989 594 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 NCOA4Q13772 614 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 DRAP1Q14919 205 aaPredicted RBP10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 TMEM132DQ14C87 1099 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms