RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CDYLQ9Y232 598 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 LOC102724428A0A0B4J2F2 783 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 NFIBO00712 420 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 AP3D1O14617 1153 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KCNN4O15554 427 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CLUP10909 449 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 MYL2P10916 166 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 NCKAP1LP55160 1127 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SIK1P57059 783 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PLIN5Q00G26 463 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SFR1Q86XK3 245 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 IPMKQ8NFU5 416 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 COPS7BQ9H9Q2 264 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 MRPL39Q9NYK5 338 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RAPGEF6Q8TEU7 1601 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CACNA1FO60840 1977 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 POLR3AO14802 1390 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PARD3Q8TEW0 1356 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 E9PBE3 544 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GRAP2O75791 330 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CCT7Q99832 543 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 THAP9Q9H5L6 903 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SLAIN2Q9P270 581 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 FEM1BQ9UK73 627 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CFAP99D6REC4 459 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GFPT1Q06210 699 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 C1orf54Q8WWF1 131 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CEP95Q96GE4 821 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 MRPL4Q9BYD3 311 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 DHX36Q9H2U1 1008 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SEC31BQ9NQW1 1179 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RNF146Q9NTX7 359 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 IMPAD1Q9NX62 359 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SRP68Q9UHB9 627 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 IP6K2Q9UHH9 426 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 TARSL2A2RTX5 802 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 XPO1O14980 1071 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RARBP10826 455 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 STAT3P40763 770 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CDH18Q13634 790 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SCARA3Q6AZY7 606 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 AK8Q96MA6 479 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KIFC1Q9BW19 673 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 DUOX2Q9NRD8 1548 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 SPTLC1O15269 473 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 H2AFYO75367 372 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 LAMC2Q13753 1193 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 DDX39BQ13838 428 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 RCN1Q15293 331 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 GSTA3Q16772 222 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF438Q7Z4V0 828 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PAGE5Q96GU1 130 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 LEMD3Q9Y2U8 911 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KCNQ3O43525 872 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 C21orf2O43822 256 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 CLK1P49759 484 aaKnown RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 ARF5P84085 180 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 PRR23CQ6ZRP0 262 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 C11orf57Q6ZUT1 292 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KLHL25Q9H0H3 589 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 KRT84Q9NSB2 600 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 FHOD1Q9Y613 1164 aa7.23□□□□□ -1.25
SYNE2-216ENST00000555002 NCK2O43639 380 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 MTRF1O75570 445 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 GYS1P13807 737 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 TCN1P20061 433 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 TMEM132DQ14C87 1099 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 PGS1Q32NB8 556 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC149Q6ZUS6 474 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 NFIL3Q16649 462 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 GALNTL6Q49A17 601 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 C10orf120Q5SQS8 335 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 OLFML2BQ68BL8 750 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 LCORLQ8N3X6 602 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 MRPL1Q9BYD6 325 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ADAM33Q9BZ11 813 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 APPL1Q9UKG1 709 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 SRPRBQ9Y5M8 271 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 PDGFRBP09619 1106 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CDK8P49336 464 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 NUMBP49757 651 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 DPCR1Q3MIW9 517 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 SWSAP1Q6NVH7 229 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 PYCARDQ9ULZ3 195 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 COL17A1Q9UMD9 1497 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ITIH6Q6UXX5 1313 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 PRIM2P49643 509 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ARFIP2P53365 341 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 RBM6P78332 1123 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 GUCY1A3Q02108 690 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 DPF3Q92784 378 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 TUBGCP3Q96CW5 907 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 SPACA7Q96KW9 195 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CRLS1Q9UJA2 301 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms