RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
SHOX2-206ENST00000554685 CNTN3Q9P232 1028 aa15.53■□□□□ 0.08
SHOX2-206ENST00000554685 R3HCC1Q9Y3T6 440 aaKnown RBP15.53■□□□□ 0.08
SHOX2-206ENST00000554685 HES2Q9Y543 173 aa15.53■□□□□ 0.08
SHOX2-206ENST00000554685 C9IYK1 514 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 ZC3H11AO75152 810 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 C4BPAP04003 597 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 KCNE1P15382 129 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 PIK3CAP42336 1068 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 EPC2Q52LR7 807 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 XKR4Q5GH76 650 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 JADE1Q6IE81 842 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 ECHDC2Q86YB7 292 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 EHBP1Q8NDI1 1231 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 ZNF397Q8NF99 534 aaPredicted RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 BEST2Q8NFU1 509 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 RSPH1Q8WYR4 309 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 FAM81BQ96LP2 452 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 RPS6KC1Q96S38 1066 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 LSM14BQ9BX40 385 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 IMPG2Q9BZV3 1241 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 INTS2Q9H0H0 1204 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 ELAC1Q9H777 363 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
SHOX2-206ENST00000554685 UBQLN1Q9UMX0 589 aaKnown RBP15.52■□□□□ 0.08
SHOX2-206ENST00000554685 KIAA0100Q14667 2235 aaKnown RBP15.51■□□□□ 0.07
SHOX2-206ENST00000554685 A0A1W2PQJ5 194 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 EFCAB14O75071 495 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 NFICP08651 508 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 AKAP5P24588 427 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 PON1P27169 355 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 WNT7BP56706 349 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 FAM189BP81408 668 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 KCNMA1Q12791 1236 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 TRPC3Q13507 836 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 GPNMBQ14956 572 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 TDRD10Q5VZ19 366 aaKnown RBP15.51■□□□□ 0.07
SHOX2-206ENST00000554685 MFSD5Q6N075 450 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 CNGA4Q8IV77 575 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 EFCAB13Q8IY85 973 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 ZNF516Q92618 1163 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 ABHD8Q96I13 439 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 RSAD1Q9HA92 442 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 SLC38A7Q9NVC3 462 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 FBXL5Q9UKA1 691 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 ITGA11Q9UKX5 1188 aa15.51■□□□□ 0.07
SHOX2-206ENST00000554685 PTPRJQ12913 1337 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 TRIM43BA6NCK2 446 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 HOXA2O43364 376 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 NRDCO43847 1150 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 HLA-DRAP01903 254 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 TBX2Q13207 712 aaPredicted RBP15.5■□□□□ 0.07
SHOX2-206ENST00000554685 NCOA4Q13772 614 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 IKBKEQ14164 716 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 LMBRD2Q68DH5 695 aaPredicted RBP15.5■□□□□ 0.07
SHOX2-206ENST00000554685 CACNA2D4Q7Z3S7 1137 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 DEFB128Q7Z7B8 93 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 OR5B17Q8NGF7 314 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 TAF4BQ92750 862 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 TRIM43Q96BQ3 446 aaPredicted RBP15.5■□□□□ 0.07
SHOX2-206ENST00000554685 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 NUCKS1Q9H1E3 243 aaKnown RBP15.5■□□□□ 0.07
SHOX2-206ENST00000554685 FAM207AQ9NSI2 230 aaPredicted RBP15.5■□□□□ 0.07
SHOX2-206ENST00000554685 TMEM161AQ9NX61 479 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 CEP72Q9P209 647 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 APEX2Q9UBZ4 518 aa15.5■□□□□ 0.07
SHOX2-206ENST00000554685 RALGAPA2Q2PPJ7 1873 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 SMIM28A0A1B0GU29 152 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 AKR1B15C9JRZ8 316 aaPredicted RBP15.49■□□□□ 0.07
SHOX2-206ENST00000554685 ENPP3O14638 875 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 ACTN1P12814 892 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 SLC9A1P19634 815 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 CYP3A5P20815 502 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
SHOX2-206ENST00000554685 SGSM1Q2NKQ1 1148 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 TSR1Q2NL82 804 aaKnown RBP15.49■□□□□ 0.07
SHOX2-206ENST00000554685 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 SMYD5Q6GMV2 418 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 GLB1LQ6UWU2 654 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 AGMOQ6ZNB7 445 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 ZNF598Q86UK7 904 aaKnown RBP15.49■□□□□ 0.07
SHOX2-206ENST00000554685 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 TAS1R2Q8TE23 839 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 KLK14Q9P0G3 267 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 LRFN2Q9ULH4 789 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 CAPN11Q9UMQ6 739 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 LUC7L2Q9Y383 392 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms