RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 FGF14Q92915 247 aa24.44■■□□□ 1.5
GABRB3-206ENST00000554556 TMEM134Q9H6X4 195 aa24.44■■□□□ 1.5
GABRB3-206ENST00000554556 SLC38A7Q9NVC3 462 aa24.44■■□□□ 1.5
GABRB3-206ENST00000554556 KCNH3Q9ULD8 1083 aa24.44■■□□□ 1.5
GABRB3-206ENST00000554556 DCNP07585 359 aaKnown RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 PEX3P56589 373 aa24.43■■□□□ 1.5
GABRB3-206ENST00000554556 STARD6P59095 220 aa24.43■■□□□ 1.5
GABRB3-206ENST00000554556 ST13P5Q8NFI4 369 aaPredicted RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 KCNG4Q8TDN1 519 aa24.43■■□□□ 1.5
GABRB3-206ENST00000554556 ACO2Q99798 780 aaKnown RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 RPP25Q9BUL9 199 aaKnown RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 MRPL4Q9BYD3 311 aaKnown RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 RBM19Q9Y4C8 960 aaKnown RBP24.43■■□□□ 1.5
GABRB3-206ENST00000554556 CDY1Q9Y6F8 540 aa24.43■■□□□ 1.5
GABRB3-206ENST00000554556 RIF1Q5UIP0 2472 aaKnown RBP24.42■■□□□ 1.5
GABRB3-206ENST00000554556 SMIM28A0A1B0GU29 152 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 SEC24BO95487 1268 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 NPTX2P47972 431 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 PTGDRQ13258 359 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 DMP1Q13316 513 aaPredicted RBP24.42■■□□□ 1.5
GABRB3-206ENST00000554556 ZNF568Q3ZCX4 644 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 PABPC1LQ4VXU2 614 aaKnown RBP24.42■■□□□ 1.5
GABRB3-206ENST00000554556 KRT79Q5XKE5 535 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 IGSF22Q8N9C0 903 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 ITFG1Q8TB96 612 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 DRC1Q96MC2 740 aa24.42■■□□□ 1.5
GABRB3-206ENST00000554556 LAD1O00515 517 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 LMNAP02545 664 aaKnown RBP24.41■■□□□ 1.5
GABRB3-206ENST00000554556 TKTP29401 623 aaKnown RBP24.41■■□□□ 1.5
GABRB3-206ENST00000554556 ELF1P32519 619 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 PFKPQ01813 784 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 XKR4Q5GH76 650 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 ZC3H14Q6PJT7 736 aaKnown RBP24.41■■□□□ 1.5
GABRB3-206ENST00000554556 C1orf210Q8IVY1 113 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 PJA1Q8NG27 643 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 TCHPQ9BT92 498 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 CDT1Q9H211 546 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 C17orf75Q9HAS0 396 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 KMT5AQ9NQR1 393 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 DLGAP2Q9P1A6 1054 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 DNMT3BQ9UBC3 853 aaKnown RBP24.41■■□□□ 1.5
GABRB3-206ENST00000554556 KCNG1Q9UIX4 513 aa24.41■■□□□ 1.5
GABRB3-206ENST00000554556 CITO14578 2027 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 MIA3Q5JRA6 1907 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 U2AF2P26368 475 aaKnown RBP eCLIP24.4■■□□□ 1.5
GABRB3-206ENST00000554556 BRCC3P46736 316 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 PRKCQQ04759 706 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 NBR1Q14596 966 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 CD300LGQ6UXG3 332 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 ALKAL1Q6UXT8 129 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 ACAP3Q96P50 834 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 GOLGA2P5Q9HBQ8 144 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 HCFC1R1Q9NWW0 138 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 MRPS23Q9Y3D9 190 aaKnown RBP24.4■■□□□ 1.5
GABRB3-206ENST00000554556 NOTCH4Q99466 2003 aa24.4■■□□□ 1.5
GABRB3-206ENST00000554556 E9PMD0 336 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 HIP1RO75146 1068 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 MCF2P10911 925 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 IGFBP6P24592 240 aaPredicted RBP24.39■■□□□ 1.49
GABRB3-206ENST00000554556 OSTNP61366 133 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 SNW1Q13573 536 aaKnown RBP24.39■■□□□ 1.49
GABRB3-206ENST00000554556 MLF2Q15773 248 aaPredicted RBP24.39■■□□□ 1.49
GABRB3-206ENST00000554556 SLC44A4Q53GD3 710 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 RSPO2Q6UXX9 243 aaPredicted RBP24.39■■□□□ 1.49
GABRB3-206ENST00000554556 CEP120Q8N960 986 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 ZNF461Q8TAF7 563 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 TIPINQ9BVW5 301 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 TARS2Q9BW92 718 aaKnown RBP24.39■■□□□ 1.49
GABRB3-206ENST00000554556 FOXQ1Q9C009 403 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 PTPRHQ9HD43 1115 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 ARHGAP28Q9P2N2 729 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 PCDHB6Q9Y5E3 794 aa24.39■■□□□ 1.49
GABRB3-206ENST00000554556 KANSL1LA0AUZ9 987 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 H7C4K7 107 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 I3L4J1 428 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 PODXLO00592 558 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 LRG1P02750 347 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 PTPN2P17706 415 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 RPL9P32969 192 aaKnown RBP24.38■■□□□ 1.49
GABRB3-206ENST00000554556 PRPHP41219 470 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 DTHD1Q6ZMT9 781 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 NPAS3Q8IXF0 933 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 C3orf58Q8NDZ4 430 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 GDE1Q9NZC3 331 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 NUB1Q9Y5A7 615 aa24.38■■□□□ 1.49
GABRB3-206ENST00000554556 SYN3O14994 580 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 RHOP08100 348 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 SP9P0CG40 484 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 KCNE1P15382 129 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 TOB1P50616 345 aaPredicted RBP24.37■■□□□ 1.49
GABRB3-206ENST00000554556 SOX4Q06945 474 aaPredicted RBP24.37■■□□□ 1.49
GABRB3-206ENST00000554556 VARS2Q5ST30 1063 aaKnown RBP24.37■■□□□ 1.49
GABRB3-206ENST00000554556 SLC8B1Q6J4K2 584 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 RINT1Q6NUQ1 792 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 MPZL3Q6UWV2 235 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 DAW1Q8N136 415 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 KXD1Q9BQD3 176 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 BCO2Q9BYV7 579 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 OSBPL6Q9BZF3 934 aa24.37■■□□□ 1.49
GABRB3-206ENST00000554556 AVENQ9NQS1 362 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms