RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CCDC195A0A1B0GUA6 201 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TGM5O43548 720 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TBCAO75347 108 aaKnown RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 PIGRP01833 764 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CLTAP09496 248 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 WEE2P0C1S8 567 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 FGFR3P22607 806 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 MATR3P43243 847 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■□ 22.9
ACTN1-213ENST00000554508 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 LIG4P49917 911 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CLCNKBP51801 687 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 GTF2BQ00403 316 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 PSMD5Q16401 504 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 RTP2Q5QGT7 225 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CCDC149Q6ZUS6 474 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 USP49Q70CQ1 688 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 BMP8AQ7Z5Y6 402 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ZDHHC14Q8IZN3 488 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TDRD5Q8NAT2 981 aaKnown RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 HASPINQ8TF76 798 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ACSF2Q96CM8 615 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 BICD1Q96G01 975 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ZNF396Q96N95 335 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CLIC6Q96NY7 704 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 USP28Q96RU2 1077 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TSPAN18Q96SJ8 248 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 PLEKHA5Q9HAU0 1116 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ANKFY1Q9P2R3 1169 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 CDH22Q9UJ99 828 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 HCN4Q9Y3Q4 1203 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 ANK1P16157 1881 aa9.53□□□□□ -0.88
ACTN1-213ENST00000554508 C2CD4DB7Z1M9 353 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 K7ENM7 598 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 HNRNPDLO14979 420 aaKnown RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 PPP6R2O75170 966 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 HARSP12081 509 aaKnown RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 SOX4Q06945 474 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 SIGLEC14Q08ET2 396 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 STK38Q15208 465 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 UVSSAQ2YD98 709 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 PRSS55Q6UWB4 352 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 CD300LGQ6UXG3 332 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 ANKS3Q6ZW76 656 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 RTL10Q7L3V2 364 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 KREMEN2Q8NCW0 462 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
ACTN1-213ENST00000554508 FIZ1Q96SL8 496 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 CLSTN3Q9BQT9 956 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 ZHX3Q9H4I2 956 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 BACE2Q9Y5Z0 518 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 ZNF318Q5VUA4 2279 aa9.52□□□□□ -0.89
ACTN1-213ENST00000554508 TTC26A0AVF1 554 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 TMEM221A6NGB7 291 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 M0R296 226 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 PODXLO00592 558 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SYN3O14994 580 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SPTLC2O15270 562 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 OGTO15294 1046 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 RFPL2O75678 378 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 ZMYND10O75800 440 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 ADRB2P07550 413 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 HNRNPA1P09651 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SPATA31D3P0C874 917 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 GAP43P17677 238 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 CYP3A5P20815 502 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SP100P23497 879 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 NMT1P30419 496 aaKnown RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 STAT6P42226 847 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 PPP2R3AQ06190 1150 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 RAB33AQ14088 237 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SEZ6Q53EL9 994 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SLFN12LQ6IEE8 588 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SPATA31D4Q6ZUB0 917 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 ZNF720Q7Z2F6 126 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms