RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 IFNAR1P17181 557 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 SREBF1P36956 1147 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 ST3GAL1Q11201 340 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 PSMD5Q16401 504 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 UBXN11Q5T124 520 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 VITQ6UXI7 678 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 CNNM3Q8NE01 707 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 GTF3C6Q969F1 213 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 MSANTD3Q96H12 275 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 APOL6Q9BWW8 343 aa18.77■□□□□ 0.6
NEK9-204ENST00000554258 SUCLA2Q9P2R7 463 aaPredicted RBP18.77■□□□□ 0.6
NEK9-204ENST00000554258 NAP1L2Q9ULW6 460 aaPredicted RBP18.77■□□□□ 0.6
NEK9-204ENST00000554258 SF3B1O75533 1304 aaKnown RBP eCLIP18.76■□□□□ 0.59
NEK9-204ENST00000554258 CCDC163A0A0D9SF12 145 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 TADA2AO75478 443 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 CAPNS1P04632 268 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 CCT2P78371 535 aaKnown RBP18.76■□□□□ 0.59
NEK9-204ENST00000554258 UAP1L1Q3KQV9 507 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 PLK5Q496M5 336 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 CEP57Q86XR8 500 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 KSR1Q8IVT5 923 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 CSGALNACT1Q8TDX6 532 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 RABGGTAQ92696 567 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 TMX3Q96JJ7 454 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 ZFP42Q96MM3 310 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 TTPALQ9BTX7 342 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
NEK9-204ENST00000554258 MIOSQ9NXC5 875 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 SPTA1P02549 2419 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 ZNF462Q96JM2 2506 aa18.76■□□□□ 0.59
NEK9-204ENST00000554258 SHROOM3Q8TF72 1996 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 WDR64B1ANS9 1081 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 ADAM12O43184 909 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 EXTL3O43909 919 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 KPNA1P52294 538 aaPredicted RBP18.75■□□□□ 0.59
NEK9-204ENST00000554258 MLLT6P55198 1093 aaPredicted RBP18.75■□□□□ 0.59
NEK9-204ENST00000554258 STK3Q13188 491 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 ELF2Q15723 593 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 MTERF2Q49AM1 385 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 NECAB1Q8N987 351 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 SMG8Q8ND04 991 aaKnown RBP18.75■□□□□ 0.59
NEK9-204ENST00000554258 DEPDC1BQ8WUY9 529 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 HNRNPLLQ8WVV9 542 aaKnown RBP18.75■□□□□ 0.59
NEK9-204ENST00000554258 PIK3R5Q8WYR1 880 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 LRIG1Q96JA1 1093 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 ASB16Q96NS5 453 aa18.75■□□□□ 0.59
NEK9-204ENST00000554258 AVENQ9NQS1 362 aaPredicted RBP18.75■□□□□ 0.59
NEK9-204ENST00000554258 VWA8A3KMH1 1905 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 IGLV3-22A0A075B6J6 115 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 NRG2O14511 850 aaPredicted RBP18.74■□□□□ 0.59
NEK9-204ENST00000554258 CTDNEP1O95476 244 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 CUL4AQ13619 759 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 TARBP2Q15633 366 aaKnown RBP18.74■□□□□ 0.59
NEK9-204ENST00000554258 WDR44Q5JSH3 913 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 LNX1Q8TBB1 728 aaPredicted RBP18.74■□□□□ 0.59
NEK9-204ENST00000554258 FAM200AQ8TCP9 573 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 SLC32A1Q9H598 525 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 RIC8AQ9NPQ8 531 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 SEPT9Q9UHD8 586 aaPredicted RBP18.74■□□□□ 0.59
NEK9-204ENST00000554258 IPPQ9Y573 584 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 CFAP46Q8IYW2 2715 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 ABCA7Q8IZY2 2146 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 URB1O60287 2271 aaKnown RBP18.74■□□□□ 0.59
NEK9-204ENST00000554258 CNTNAP5Q8WYK1 1306 aa18.74■□□□□ 0.59
NEK9-204ENST00000554258 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 PRPF3O43395 683 aaKnown RBP18.73■□□□□ 0.59
NEK9-204ENST00000554258 RHOBTB1O94844 696 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 PTPN2P17706 415 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 HOXA11P31270 313 aaPredicted RBP18.73■□□□□ 0.59
NEK9-204ENST00000554258 SOX9P48436 509 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 UGCGQ16739 394 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 FAM171A1Q5VUB5 890 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 DUSP15Q9H1R2 295 aaPredicted RBP18.73■□□□□ 0.59
NEK9-204ENST00000554258 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 C8orf33Q9H7E9 229 aaPredicted RBP18.73■□□□□ 0.59
NEK9-204ENST00000554258 IFT122Q9HBG6 1241 aa18.73■□□□□ 0.59
NEK9-204ENST00000554258 SPAARA0A1B0GVQ0 90 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 CDX4O14627 284 aaPredicted RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 KHNYNO15037 678 aaKnown RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 VIPR2P41587 438 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 ADCY7P51828 1080 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 NAPAP54920 295 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 SIM1P81133 766 aaPredicted RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 SETQ01105 290 aaPredicted RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 SCAPQ12770 1279 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 AP3B2Q13367 1082 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 RAB33AQ14088 237 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 RTL10Q7L3V2 364 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 LURAP1LQ8IV03 231 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 SYNPOQ8N3V7 929 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 CCDC82Q8N4S0 544 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 HASPINQ8TF76 798 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 SMARCD2Q92925 531 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 LLPHQ9BRT6 129 aaKnown RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 RNF26Q9BY78 433 aaPredicted RBP18.72■□□□□ 0.59
NEK9-204ENST00000554258 DISC1Q9NRI5 854 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 HES2Q9Y543 173 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms