RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 PDZD7Q9H5P4 517 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 CDH7Q9ULB5 785 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 ZFP37Q9Y6Q3 630 aaPredicted RBP9.73□□□□□ -0.85
TDP1-208ENST00000553989 ANHXE9PGG2 379 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 WNT7AO00755 349 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 GPR37O15354 613 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 JAK2O60674 1132 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 MED24O75448 989 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 LARGE1O95461 756 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
TDP1-208ENST00000553989 FDPSP14324 419 aaKnown RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 GPC5P78333 572 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 GUCY1B3Q02153 619 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 UBXN2BQ14CS0 331 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 PPP2R5AQ15172 486 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 DCAF4L1Q3SXM0 396 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 CDCA2Q69YH5 1023 aaPredicted RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 PADI6Q6TGC4 694 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 PARM1Q6UWI2 310 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 ERMP1Q7Z2K6 904 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 APBB1IPQ7Z5R6 666 aaPredicted RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 CATSPER3Q86XQ3 398 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 NSUN7Q8NE18 718 aaKnown RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 PJA1Q8NG27 643 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 LNX1Q8TBB1 728 aaPredicted RBP9.72□□□□□ -0.85
TDP1-208ENST00000553989 PIK3R5Q8WYR1 880 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 FGF14Q92915 247 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 IFT74Q96LB3 600 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 MTMR9Q96QG7 549 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 NACC1Q96RE7 527 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 PPP1R9BQ96SB3 815 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 CLSTN3Q9BQT9 956 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 TMEM60Q9H2L4 133 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 SEMA4AQ9H3S1 761 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 FZD8Q9H461 694 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 SLC2A4RGQ9NR83 387 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 LMBRD1Q9NUN5 540 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 USP20Q9Y2K6 914 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 FAM186AA6NE01 2351 aa9.72□□□□□ -0.85
TDP1-208ENST00000553989 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
TDP1-208ENST00000553989 RIF1Q5UIP0 2472 aaKnown RBP9.71□□□□□ -0.85
TDP1-208ENST00000553989 ACKR2O00590 384 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 PTGESO14684 152 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 B3GAT3O94766 335 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 OR52Z1P0C646 297 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 HOXA9P31269 272 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 OR1D2P34982 312 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 NAMPTP43490 491 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 MLF2Q15773 248 aaPredicted RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 FAM187BQ17R55 369 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 PABPC1LQ4VXU2 614 aaKnown RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 AXDND1Q5T1B0 1012 aaPredicted RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 ING5Q8WYH8 240 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 BSNDQ8WZ55 320 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 FGF13Q92913 245 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 KXD1Q9BQD3 176 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 KIFC3Q9BVG8 833 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 BCO2Q9BYV7 579 aa9.71□□□□□ -0.86
TDP1-208ENST00000553989 SPATA6Q9NWH7 488 aaPredicted RBP9.71□□□□□ -0.86
TDP1-208ENST00000553989 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 DOCK8Q8NF50 2099 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 KANSL1LA0AUZ9 987 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 ADAM12O43184 909 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 LAMTOR5O43504 91 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 TRAPPC3O43617 180 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 LRRN2O75325 713 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 LETM1O95202 739 aaPredicted RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 PAPLNO95428 1278 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 SP9P0CG40 484 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 CYP11B2P19099 503 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 ELF1P32519 619 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 CCT6AP40227 531 aaKnown RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 CLCNKBP51801 687 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 YARSP54577 528 aaKnown RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 PFKPQ01813 784 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 ZNF174Q15697 407 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 ATF7IP2Q5U623 682 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 EEF1DP3Q658K8 133 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 ITFG1Q8TB96 612 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 SYAP1Q96A49 352 aaPredicted RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 TMX3Q96JJ7 454 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 POLR3CQ9BUI4 534 aaPredicted RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 CXCL16Q9H2A7 254 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 HCFC1R1Q9NWW0 138 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms