RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 FNDC1Q4ZHG4 1894 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-210ENST00000553950 LACTBL1A8MY62 500 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 INPPL1O15357 1258 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 ZC3H11AO75152 810 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHMT2-210ENST00000553950 ADCY5O95622 1261 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 AMHP03971 560 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 CSF2RAP15509 400 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 CYP3A5P20815 502 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 PIK3CAP42336 1068 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 FAM189BP81408 668 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 GRIK3Q13003 919 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 BIRC3Q13489 604 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 GPNMBQ14956 572 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 NR1I3Q14994 352 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 EXOC3L4Q17RC7 722 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 ZACNQ401N2 412 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 XKR4Q5GH76 650 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
SHMT2-210ENST00000553950 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 LINC01599Q8WXQ3 324 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 KIF12Q96FN5 646 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 MRPL9Q9BYD2 267 aaKnown RBP15.68■□□□□ 0.1
SHMT2-210ENST00000553950 OSBPL7Q9BZF2 842 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 KANSL3Q9P2N6 904 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 HES2Q9Y543 173 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 PCDHB7Q9Y5E2 793 aa15.68■□□□□ 0.1
SHMT2-210ENST00000553950 CARNS1A5YM72 827 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 PHACTR2O75167 634 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 ATF7P17544 494 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-210ENST00000553950 AKAP5P24588 427 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 MLH1P40692 756 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 KCNJ6P48051 423 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 GCLMP48507 274 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 DLG4P78352 724 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 TFAMQ00059 246 aaKnown RBP15.67■□□□□ 0.1
SHMT2-210ENST00000553950 SPECC1LQ69YQ0 1117 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 SMYD5Q6GMV2 418 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 JADE1Q6IE81 842 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 ALKAL1Q6UXT8 129 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 FMNL3Q8IVF7 1028 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 TMEM192Q8IY95 271 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 PLEKHO2Q8TD55 490 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 DPF3Q92784 378 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 PCMTD1Q96MG8 357 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-210ENST00000553950 NUP58Q9BVL2 599 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 MTMR12Q9C0I1 747 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 MMRN2Q9H8L6 949 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 COQ4Q9Y3A0 265 aa15.67■□□□□ 0.1
SHMT2-210ENST00000553950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHMT2-210ENST00000553950 TULP1O00294 542 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-210ENST00000553950 ENPP3O14638 875 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 THP07101 528 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 NFICP08651 508 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 PAX3P23760 479 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 PPP3CAQ08209 521 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 TRPC3Q13507 836 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 AGMOQ6ZNB7 445 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 C15orf39Q6ZRI6 1047 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 SV2AQ7L0J3 742 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 VSTM4Q8IW00 320 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 EFCAB13Q8IY85 973 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 TAF4BQ92750 862 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 UROC1Q96N76 676 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-210ENST00000553950 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 COL4A6Q14031 1691 aa15.66■□□□□ 0.1
SHMT2-210ENST00000553950 PTPRSQ13332 1948 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 ARL5CA6NH57 179 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 TRIM21P19474 475 aaKnown RBP15.65■□□□□ 0.1
SHMT2-210ENST00000553950 ITGB8P26012 769 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 ATICP31939 592 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 PNPLA4P41247 253 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 SYCP1Q15431 976 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 CBWD6Q4V339 395 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 EPC2Q52LR7 807 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 WDR44Q5JSH3 913 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 CBWD3Q5JTY5 395 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 CBWD5Q5RIA9 395 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 C1orf220Q5T0J3 134 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 TRAPPC11Q7Z392 1133 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 DRC7Q8IY82 874 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 NEK11Q8NG66 645 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 BADQ92934 168 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 FAXDC2Q96IV6 333 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 PLCB1Q9NQ66 1216 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 PTPRJQ12913 1337 aa15.65■□□□□ 0.1
SHMT2-210ENST00000553950 SMIM28A0A1B0GU29 152 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 CLSTN1O94985 981 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 STAU1O95793 577 aaKnown RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 FGBP02675 491 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 C4BPAP04003 597 aaKnown RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 P4HA1P13674 534 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 PBX1P40424 430 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 NCOA4Q13772 614 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms