RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CMTR2Q8IYT2 770 aaKnown RBP5.45□□□□□ -1.54
SCFD1-210ENST00000553693 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCFD1-210ENST00000553693 CAVIN3Q969G5 261 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 ADAM2Q99965 735 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 LDAHQ9H6V9 325 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 SYBUQ9NX95 663 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 NOX1Q9Y5S8 564 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 PNPLA7Q6ZV29 1317 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 SPDEFO95238 335 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 KRTAP10-9P60411 292 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 TP53BP2Q13625 1128 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ATP2B3Q16720 1220 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ERCC6LQ2NKX8 1250 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 TSHZ3Q63HK5 1081 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ZNF529Q6P280 563 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 SEM1Q6ZVN7 128 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCFD1-210ENST00000553693 GPR150Q8NGU9 434 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 PCSK5Q92824 1860 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ZNF277Q9NRM2 450 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-210ENST00000553693 SAP30BPQ9UHR5 308 aaKnown RBP5.44□□□□□ -1.54
SCFD1-210ENST00000553693 ZNHIT2Q9UHR6 403 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 DNM3Q9UQ16 869 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 MAP3K2Q9Y2U5 619 aa5.44□□□□□ -1.54
SCFD1-210ENST00000553693 A0A1B0GTW7 788 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 TRIM75PA6NK02 468 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 AGXTP21549 392 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 GCSHP23434 173 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 SEPT2Q15019 361 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 EGFLAMQ63HQ2 1017 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 STON2Q8WXE9 905 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 ASB10Q8WXI3 467 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 C7orf25Q9BPX7 421 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 ALOXE3Q9BYJ1 711 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 PUS7LQ9H0K6 701 aaKnown RBP5.43□□□□□ -1.54
SCFD1-210ENST00000553693 RIOX1Q9H6W3 641 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 KCNE5Q9UJ90 142 aa5.43□□□□□ -1.54
SCFD1-210ENST00000553693 ZAR1LA6NP61 321 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 ITGAMP11215 1152 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 FPR1P21462 350 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 FDXRP22570 491 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SLC6A9P48067 706 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SEC24CP53992 1094 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 OCA2Q04671 838 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 MTM1Q13496 603 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 UBXN2BQ14CS0 331 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 STRIP1Q5VSL9 837 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 LRCH2Q5VUJ6 765 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 FOXR2Q6PJQ5 311 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 FAM43AQ8N2R8 423 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 TMEM132CQ8N3T6 1108 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SLC5A4Q9NY91 659 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 TESQ9UGI8 421 aaKnown RBP5.42□□□□□ -1.54
SCFD1-210ENST00000553693 SIK3Q9Y2K2 1263 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 ACTL7AQ9Y615 435 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
SCFD1-210ENST00000553693 WNT10BO00744 389 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 EGR2P11161 476 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-210ENST00000553693 POU3F3P20264 500 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-210ENST00000553693 FGFR4P22455 802 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 PCSK1P29120 753 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 WASP42768 502 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 ATXN1P54253 815 aaKnown RBP5.41□□□□□ -1.54
SCFD1-210ENST00000553693 CXADRP78310 365 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 CREMQ03060 361 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 MPP3Q13368 585 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 CLUL1Q15846 466 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 DPY19L2P1Q6NXN4 242 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 OLFML1Q6UWY5 402 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 MIGA2Q7L4E1 593 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 PRIMA1Q86XR5 153 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 CNTD1Q8N815 330 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 CCHCR1Q8TD31 782 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 ZSWIM1Q9BR11 485 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 SLC23A1Q9UHI7 598 aa5.41□□□□□ -1.54
SCFD1-210ENST00000553693 EPN1Q9Y6I3 576 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-210ENST00000553693 GPANK1O95872 356 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 TYRP1P17643 537 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 DDCP20711 480 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 SLC16A1P53985 500 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 RNF187Q5TA31 235 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 B3GNTL1Q67FW5 361 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 UBE3BQ7Z3V4 1068 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 FITM2Q8N6M3 262 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 FUBP1Q96AE4 644 aaKnown RBP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 FAM126AQ9BYI3 521 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 TMEM74BQ9NUR3 256 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 TBCCD1Q9NVR7 557 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 FBXO34Q9NWN3 711 aa5.4□□□□□ -1.54
SCFD1-210ENST00000553693 RUVBL1Q9Y265 456 aaKnown RBP5.4□□□□□ -1.54
SCFD1-210ENST00000553693 MAST3O60307 1309 aa5.4□□□□□ -1.55
SCFD1-210ENST00000553693 ESRRBO95718 433 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms