RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 HARSP12081 509 aaKnown RBP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 PDIA4P13667 645 aaKnown RBP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 LIG4P49917 911 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 SLC39A14Q15043 492 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 PSMD5Q16401 504 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 PTPN21Q16825 1174 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 LILRA6Q6PI73 481 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 TRIM67Q6ZTA4 783 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 CCDC149Q6ZUS6 474 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 USP49Q70CQ1 688 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 GLYCTKQ8IVS8 523 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 HSCBQ8IWL3 235 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 ZDHHC14Q8IZN3 488 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 KRI1Q8N9T8 703 aaKnown RBP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 TDRD5Q8NAT2 981 aaKnown RBP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 LNX1Q8TBB1 728 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-207ENST00000553290 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 ZHX3Q9H4I2 956 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 ZDHHC7Q9NXF8 308 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 TBX20Q9UMR3 447 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 DENND4AQ7Z401 1863 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 C2orf16Q68DN1 1984 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 HNRNPDLO14979 420 aaKnown RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 PAPLNO95428 1278 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 PIGRP01833 764 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 SPATA31D3P0C874 917 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 RPL17P18621 184 aaKnown RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 FGFR3P22607 806 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 RPL9P32969 192 aaKnown RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 SOX4Q06945 474 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 KYAT1Q16773 422 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 RRAGBQ5VZM2 374 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 SPATA31D4Q6ZUB0 917 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 OTOP3Q7RTS5 596 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 BMP8AQ7Z5Y6 402 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 KREMEN2Q8NCW0 462 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 ACSF2Q96CM8 615 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 MFSD14AQ96MC6 490 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 ZMAT2Q96NC0 199 aaKnown RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 CLSTN3Q9BQT9 956 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 PLEKHA5Q9HAU0 1116 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 GOLGA2P5Q9HBQ8 144 aa14.15□□□□□ -0.14
ACTN1-207ENST00000553290 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-207ENST00000553290 TECTAO75443 2155 aa14.15□□□□□ -0.15
ACTN1-207ENST00000553290 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 TMEM221A6NGB7 291 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 M0R296 226 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 PODXLO00592 558 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 RFPL2O75678 378 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 CLTAP09496 248 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 NASPP49321 788 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 GTF2BQ00403 316 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 SIGLEC14Q08ET2 396 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 CD300LGQ6UXG3 332 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 HFE2Q6ZVN8 426 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 SV2BQ7L1I2 683 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 C3orf58Q8NDZ4 430 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 SMG7Q92540 1137 aaKnown RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 STAMQ92783 540 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 ZNF396Q96N95 335 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 FIZ1Q96SL8 496 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 HAPLN2Q9GZV7 340 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 WDR6Q9NNW5 1121 aaKnown RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 SORCS3Q9UPU3 1222 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 MYO10Q9HD67 2058 aa14.14□□□□□ -0.15
ACTN1-207ENST00000553290 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
ACTN1-207ENST00000553290 TTC26A0AVF1 554 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 OGTO15294 1046 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 ZMYND10O75800 440 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 MYBP10242 640 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 IGFBP6P24592 240 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-207ENST00000553290 TKTP29401 623 aaKnown RBP14.13□□□□□ -0.15
ACTN1-207ENST00000553290 MTMR3Q13615 1198 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 RAB33AQ14088 237 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 STK38Q15208 465 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 SEZ6Q53EL9 994 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 LIN9Q5TKA1 542 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 CCDC73Q6ZRK6 1079 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 MAP4K3Q8IVH8 894 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 UBALD2Q8IYN6 164 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 FEZF2Q8TBJ5 459 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 C18orf25Q96B23 403 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-207ENST00000553290 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-207ENST00000553290 TSPAN18Q96SJ8 248 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 PRKD2Q9BZL6 878 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 PIDD1Q9HB75 910 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 MTRRQ9UBK8 725 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 SEL1LQ9UBV2 794 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 LIMD1Q9UGP4 676 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 FBXW11Q9UKB1 542 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 BACE2Q9Y5Z0 518 aa14.13□□□□□ -0.15
ACTN1-207ENST00000553290 MYH15Q9Y2K3 1946 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms