RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 PLXNA3P51805 1871 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 TRIOO75962 3097 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 TMEM189-UBE2V1I3L0A0 370 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
CDK4-215ENST00000553237 BRCC3P46736 316 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 NCKAP1LP55160 1127 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 NOLC1Q14978 699 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK4-215ENST00000553237 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
CDK4-215ENST00000553237 OTOP3Q7RTS5 596 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 BMP8AQ7Z5Y6 402 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 C3orf58Q8NDZ4 430 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 C18orf25Q96B23 403 aaPredicted RBP17.38■□□□□ 0.37
CDK4-215ENST00000553237 ZNF707Q96C28 371 aaPredicted RBP17.38■□□□□ 0.37
CDK4-215ENST00000553237 UROC1Q96N76 676 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 ODF2LQ9ULJ1 636 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 ARIH1Q9Y4X5 557 aaPredicted RBP17.38■□□□□ 0.37
CDK4-215ENST00000553237 MYO10Q9HD67 2058 aa17.38■□□□□ 0.37
CDK4-215ENST00000553237 H0YCG3 227 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 CLDN3O15551 220 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 C1RP00736 705 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 KCNE1P15382 129 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 FGFR3P22607 806 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 TKTP29401 623 aaKnown RBP17.37■□□□□ 0.37
CDK4-215ENST00000553237 MCL1Q07820 350 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 MTMR3Q13615 1198 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 LARP4BQ92615 738 aaKnown RBP17.37■□□□□ 0.37
CDK4-215ENST00000553237 ASIC4Q96FT7 647 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 DDX27Q96GQ7 796 aaKnown RBP17.37■□□□□ 0.37
CDK4-215ENST00000553237 PARVGQ9HBI0 331 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 WDR6Q9NNW5 1121 aaKnown RBP17.37■□□□□ 0.37
CDK4-215ENST00000553237 SLC38A7Q9NVC3 462 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 FBXO2Q9UK22 296 aaPredicted RBP17.37■□□□□ 0.37
CDK4-215ENST00000553237 MTMR6Q9Y217 621 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
CDK4-215ENST00000553237 K7ENM7 598 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 PODXLO00592 558 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 ZMYND10O75800 440 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 OR1D2P34982 312 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 DDIT3P35638 169 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 SPAG1Q07617 926 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 PDXDC1Q6P996 788 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 CYP26C1Q6V0L0 522 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 HSCBQ8IWL3 235 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 SUGP1Q8IWZ8 645 aaKnown RBP17.36■□□□□ 0.37
CDK4-215ENST00000553237 UBALD2Q8IYN6 164 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 PRKD2Q9BZL6 878 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 ZDHHC7Q9NXF8 308 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 CNTN3Q9P232 1028 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 TBX20Q9UMR3 447 aa17.36■□□□□ 0.37
CDK4-215ENST00000553237 SRPRBQ9Y5M8 271 aaKnown RBP17.36■□□□□ 0.37
CDK4-215ENST00000553237 MYH11P35749 1972 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 TRAK2O60296 914 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 TBCAO75347 108 aaKnown RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 PDGFBP01127 241 aaPredicted RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 CXCL8P10145 99 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 NMT1P30419 496 aaKnown RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 GBP2P32456 591 aaPredicted RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 LIG4P49917 911 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 ZNF131P52739 623 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 RSPO2Q6UXX9 243 aaPredicted RBP17.35■□□□□ 0.37
CDK4-215ENST00000553237 TMEM130Q8N3G9 435 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 FBXL6Q8N531 539 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 RHOBTB2Q9BYZ6 727 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 MTRRQ9UBK8 725 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 FBXW11Q9UKB1 542 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 CDY1Q9Y6F8 540 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 CLUHO75153 1309 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 C2orf16Q68DN1 1984 aa17.35■□□□□ 0.37
CDK4-215ENST00000553237 STX6O43752 255 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 C8AP07357 584 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 TNFSF9P41273 254 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 RAB33AQ14088 237 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 PPM1LQ5SGD2 360 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 ZBTB41Q5SVQ8 909 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 IER5LQ5T953 404 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 LIN9Q5TKA1 542 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 RRAGBQ5VZM2 374 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 MUC6Q6W4X9 2439 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 STAMQ92783 540 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 MYADMQ96S97 322 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 TUBGCP4Q9UGJ1 667 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 NUB1Q9Y5A7 615 aa17.34■□□□□ 0.37
CDK4-215ENST00000553237 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 CLTAP09496 248 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
CDK4-215ENST00000553237 NTHL1P78549 312 aa17.33■□□□□ 0.36
CDK4-215ENST00000553237 ZC2HC1CQ53FD0 456 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms