RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 KCNK4Q9NYG8 393 aa9.45□□□□□ -0.9
PRIM1-208ENST00000552590 SSX2IPQ9Y2D8 614 aa9.45□□□□□ -0.9
PRIM1-208ENST00000552590 FAN1Q9Y2M0 1017 aa9.45□□□□□ -0.9
PRIM1-208ENST00000552590 POLQO75417 2590 aa9.45□□□□□ -0.9
PRIM1-208ENST00000552590 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 B4E1Z4 1266 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 NRP1O14786 923 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 DCLK1O15075 740 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 FOXP2O15409 715 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 MEFVO15553 781 aaPredicted RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 WISP1O95388 367 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 ALDH2P05091 517 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 RPL17P18621 184 aaKnown RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 SNRPNP63162 240 aaKnown RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 ZNF423Q2M1K9 1284 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 SAMD3Q8N6K7 520 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 KBTBD3Q8NAB2 608 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 ZNF668Q96K58 619 aaPredicted RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 TTC14Q96N46 770 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 ZNF334Q9HCZ1 680 aaPredicted RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 HCFC1R1Q9NWW0 138 aa9.44□□□□□ -0.9
PRIM1-208ENST00000552590 USP9YO00507 2555 aaPredicted RBP9.44□□□□□ -0.9
PRIM1-208ENST00000552590 KNTC1P50748 2209 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 THADAQ6YHU6 1953 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 CAPN9O14815 690 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
PRIM1-208ENST00000552590 OFD1O75665 1012 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 AKAP3O75969 853 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 FGRP09769 529 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
PRIM1-208ENST00000552590 COL8A1P27658 744 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 GDI1P31150 447 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 ABCG1P45844 678 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 MAPK8P45983 427 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 ELF2Q15723 593 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 NLRX1Q86UT6 975 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 PNPLA1Q8N8W4 532 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 FAM181AQ8N9Y4 354 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 TRMT61BQ9BVS5 477 aaKnown RBP9.43□□□□□ -0.9
PRIM1-208ENST00000552590 MARCH5Q9NX47 278 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 ANAPC4Q9UJX5 808 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 PRG3Q9Y2Y8 225 aaPredicted RBP9.43□□□□□ -0.9
PRIM1-208ENST00000552590 PDCD11Q14690 1871 aaKnown RBP9.43□□□□□ -0.9
PRIM1-208ENST00000552590 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
PRIM1-208ENST00000552590 CCDC163A0A0D9SF12 145 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 RHOBTB1O94844 696 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 FCARP24071 287 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PHKA2P46019 1235 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 STAT5BP51692 787 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
PRIM1-208ENST00000552590 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
PRIM1-208ENST00000552590 RELBQ01201 579 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 DSG1Q02413 1049 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PABPC1LQ4VXU2 614 aaKnown RBP9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PKN3Q6P5Z2 889 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PLPPR4Q7Z2D5 763 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PLEKHM2Q8IWE5 1019 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 METTL13Q8N6R0 699 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PRORYQ9H606 182 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
PRIM1-208ENST00000552590 SETD2Q9BYW2 2564 aaPredicted RBP9.42□□□□□ -0.9
PRIM1-208ENST00000552590 PTPRBP23467 1997 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 CENPEQ02224 2701 aa9.42□□□□□ -0.9
PRIM1-208ENST00000552590 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 F8W810 466 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 OIP5O43482 229 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 CSDE1O75534 798 aaKnown RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 C1RP00736 705 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 HNRNPA1P09651 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 EIF4BP23588 611 aaKnown RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 ITPKBP27987 946 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 SOX9P48436 509 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 CYP4F3Q08477 520 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 SEMA3BQ13214 749 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 COLEC12Q5KU26 742 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 PPM1LQ5SGD2 360 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 PCNX4Q63HM2 1172 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 PCSK4Q6UW60 755 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 RSPH1Q8WYR4 309 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 CHST12Q9NRB3 414 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 POLR3BQ9NW08 1133 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 DACT1Q9NYF0 836 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 GDE1Q9NZC3 331 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 DNMT3BQ9UBC3 853 aaKnown RBP9.41□□□□□ -0.9
PRIM1-208ENST00000552590 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
PRIM1-208ENST00000552590 CAPN8A6NHC0 703 aa9.4□□□□□ -0.9
PRIM1-208ENST00000552590 ZBTB42B2RXF5 422 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms