RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SERTAD1Q9UHV2 236 aa16.81■□□□□ 0.28
PRPF40B-211ENST00000551063 FAM50BQ9Y247 325 aa16.81■□□□□ 0.28
PRPF40B-211ENST00000551063 UBE4BO95155 1302 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 PVALEFA0A1B0GWK0 134 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 TTC26A0AVF1 554 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 GRXCR2A6NFK2 248 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 ANKRD63C9JTQ0 380 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 F8W810 466 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 H3BQ06 376 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 LILRB3O75022 631 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 TADA2AO75478 443 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 ADRB2P07550 413 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 CA8P35219 290 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 ANP32AP39687 249 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 SYKP43405 635 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 DSG1Q02413 1049 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 EHHADHQ08426 723 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 USP41Q3LFD5 358 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 FAM26FQ5R3K3 315 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 CD302Q8IX05 232 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 VN1R2Q8NFZ6 395 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 AUTS2Q8WXX7 1259 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 CPSF3Q9UKF6 684 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-211ENST00000551063 TISP43B9A030 160 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 TNFSF9P41273 254 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 AFMP43652 599 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 NDUFA8P51970 172 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CREMQ03060 361 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 SOX4Q06945 474 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 KCNA1Q09470 495 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 SMAD4Q13485 552 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CUL4BQ13620 913 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 UPP1Q16831 310 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 KIAA1841Q6NSI8 718 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 SYCP3Q8IZU3 236 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 GJD3Q8N144 294 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CASP10Q92851 521 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 PAGE5Q96GU1 130 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 MSLNLQ96KJ4 702 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CLEC1BQ9P126 229 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 AGO2Q9UKV8 859 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 HCFC2Q9Y5Z7 792 aa16.79■□□□□ 0.28
PRPF40B-211ENST00000551063 PODXLO00592 558 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 XPOTO43592 962 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 B3GAT3O94766 335 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 IL9P15248 144 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 CYP3A5P20815 502 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 GARTP22102 1010 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 ADSSP30520 456 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 RPL9P32969 192 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 CLCNKBP51801 687 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 EPM2AIP1Q7L775 607 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 RABGGTAQ92696 567 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 TDRD15B5MCY1 1934 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-211ENST00000551063 PI4K2BG5E9Z4 385 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 KIAA0391O15091 583 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 GPR37L1O60883 481 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 HOXB8P17481 243 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 CASP1P29466 404 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 SSTR3P32745 418 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 PDXDC1Q6P996 788 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 SMRP1Q8NCR6 262 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 HPS3Q969F9 1004 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 LRFN3Q9BTN0 628 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms