RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TRIP13Q15645 432 aaPredicted RBP16.01■□□□□ 0.15
PDE1B-207ENST00000550620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDE1B-207ENST00000550620 ARMC2Q8NEN0 867 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 MICAL1Q8TDZ2 1067 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 ATG4AQ8WYN0 398 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 INPP5DQ92835 1189 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 LRRC4BQ9NT99 713 aa16.01■□□□□ 0.15
PDE1B-207ENST00000550620 GSTTP1A0A1W2PQM5 241 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 G3V3G9 751 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 MAGEB2O15479 319 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 PLS3P13797 630 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 ALDH3A1P30838 453 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 RASSF2P50749 326 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 BLMHQ13867 455 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 TAF11Q15544 211 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 KRT39Q6A163 491 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 NT5C1BQ96P26 610 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 TMEM237Q96Q45 408 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 IDI2Q9BXS1 227 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 SYNPO2Q9UMS6 1093 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 ZNF536O15090 1300 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 GDF11O95390 407 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 MYBL1P10243 752 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 CETPP11597 493 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 STAT2P52630 851 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 LLGL1Q15334 1064 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 TMED2Q15363 201 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 FAM47EQ6ZV65 393 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 LRRC37BQ96QE4 947 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 RIT2Q99578 217 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 PAIP2Q9BPZ3 127 aaKnown RBP16■□□□□ 0.15
PDE1B-207ENST00000550620 MYLK2Q9H1R3 596 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 SLC24A3Q9HC58 644 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 ACP6Q9NPH0 428 aa16■□□□□ 0.15
PDE1B-207ENST00000550620 AVENQ9NQS1 362 aaPredicted RBP16■□□□□ 0.15
PDE1B-207ENST00000550620 BTAF1O14981 1849 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 TISP43B9A030 160 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 HGSO14964 777 aaPredicted RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 SLC18A1P54219 525 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 SPARCL1Q14515 664 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 CCNG2Q16589 344 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 IZUMO3Q5VZ72 239 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 MIS18BP1Q6P0N0 1132 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 RGS9BPQ6ZS82 235 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 ANKLE1Q8NAG6 615 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 PLEKHO2Q8TD55 490 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 ERP27Q96DN0 273 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 NAF1Q96HR8 494 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 ST6GALNAC4Q9H4F1 302 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 RNPEPL1Q9HAU8 725 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 EURLQ9NYK6 297 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 SENP1Q9P0U3 644 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 SMG5Q9UPR3 1016 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 IPO5O00410 1097 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 FOXN2P32314 431 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 VPS41P49754 854 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 GPC3P51654 580 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 GTF2BQ00403 316 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 PTP4A2Q12974 167 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 GRIK3Q13003 919 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 RBM26Q5T8P6 1007 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 DHX37Q8IY37 1157 aaKnown RBP15.99■□□□□ 0.15
PDE1B-207ENST00000550620 SLC17A8Q8NDX2 589 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 HELQQ8TDG4 1101 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 PHTF1Q9UMS5 762 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 COQ4Q9Y3A0 265 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 NEU2Q9Y3R4 380 aa15.99■□□□□ 0.15
PDE1B-207ENST00000550620 PRPF4O43172 522 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 SKAP2O75563 359 aaPredicted RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 ASMTLO95671 621 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 P4HBP07237 508 aaKnown RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 ARP10275 920 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 CALB2P22676 271 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 CACNB3P54284 484 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 MCCD1P59942 119 aaPredicted RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 UBXN2AP68543 259 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 ADCY1Q08828 1119 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 DOK7Q18PE1 504 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 SPDYAQ5MJ70 313 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 MIER3Q7Z3K6 550 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 HAUS6Q7Z4H7 955 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 USP37Q86T82 979 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 MAML1Q92585 1016 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 UTP4Q969X6 686 aaKnown RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 SAAL1Q96ER3 474 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 TTC25Q96NG3 672 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms