RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TTC30BQ8N4P2 665 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 FDXACB1Q9BRP7 624 aaPredicted RBP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 CPP00450 1065 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 ATP1A2P50993 1020 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 RAB27AP51159 221 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 NR1H3Q13133 447 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 SNX1Q13596 522 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 NT5C1AQ9BXI3 368 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 PCSK1NQ9UHG2 260 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 PTPN22Q9Y2R2 807 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 I3L4J1 428 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 VIMP08670 466 aaKnown RBP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 IRF1P10914 325 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 ELNP15502 786 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 MTF1Q14872 753 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 RPS6KA2Q15349 733 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 FYB2Q5VWT5 728 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 DAGLBQ8NCG7 672 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 N4BP2L2Q92802 583 aaPredicted RBP12.94□□□□□ -0.34
NR4A1-215ENST00000550557 CFAP57Q96MR6 1250 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 RUNDC3BQ96NL0 473 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 CEP72Q9P209 647 aa12.94□□□□□ -0.34
NR4A1-215ENST00000550557 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 ZC2HC1CQ53FD0 456 aaPredicted RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 STMN2Q93045 179 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 ATP6V1E2Q96A05 226 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 GNL1P36915 607 aaPredicted RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 NAMPTP43490 491 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 LIG3P49916 1009 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CEP85LQ5SZL2 805 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 HPDLQ96IR7 371 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 AGO4Q9HCK5 861 aaKnown RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 JRKLQ9Y4A0 524 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 NFKBIEO00221 500 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 OGTO15294 1046 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CCL23P55773 120 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CD302Q8IX05 232 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 LMNTD2Q8IXW0 634 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CACNA2D3Q8IZS8 1091 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 MRPL9Q9BYD2 267 aaKnown RBP12.93□□□□□ -0.34
NR4A1-215ENST00000550557 ABCF3Q9NUQ8 709 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 LCMT1Q9UIC8 334 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 CAPN7Q9Y6W3 813 aa12.93□□□□□ -0.34
NR4A1-215ENST00000550557 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 MYO1CO00159 1063 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 RHOBTB3O94955 611 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 CKMP06732 381 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 NCAPHQ15003 741 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 PKN1Q16512 942 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 RAPH1Q70E73 1250 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 FSD1LQ9BXM9 530 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 TTC26A0AVF1 554 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 EXTL3O43909 919 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 CIB2O75838 187 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 ZNF235Q14590 738 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 TDRD10Q5VZ19 366 aaKnown RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 HPS3Q969F9 1004 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 DHX35Q9H5Z1 703 aaKnown RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 MROH7Q68CQ1 1323 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 SLC37A4O43826 429 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 CTNNA1P35221 906 aaKnown RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 SOX5P35711 763 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 RGS7P49802 495 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 HSD17B4P51659 736 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 TTC19Q6DKK2 380 aaPredicted RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 MED15Q96RN5 788 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 EPAS1Q99814 870 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
NR4A1-215ENST00000550557 IGFLR1Q9H665 355 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 MYMKA6NI61 221 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 CLGNO14967 610 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 KLRC2P26717 231 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 RWDD2BP57060 319 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 GUCY2DQ02846 1103 aa12.92□□□□□ -0.34
NR4A1-215ENST00000550557 ZNF280DQ6N043 979 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms