RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PSMD5Q16401 504 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 RTL10Q7L3V2 364 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 CEP120Q8N960 986 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 HASPINQ8TF76 798 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 SNX21Q969T3 373 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 PBXIP1Q96AQ6 731 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 BICD1Q96G01 975 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 TSPAN18Q96SJ8 248 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 PIDD1Q9HB75 910 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 BLOC1S4Q9NUP1 217 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 ANKFY1Q9P2R3 1169 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 STK17AQ9UEE5 414 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 MYH11P35749 1972 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 TMEM221A6NGB7 291 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 M0R296 226 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 HNRNPDLO14979 420 aaKnown RBP12.44□□□□□ -0.42
BEST3-209ENST00000548658 STX6O43752 255 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 CLTAP09496 248 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 FGFR3P22607 806 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 LIG4P49917 911 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 RESTQ13127 1097 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 MCM6Q14566 821 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 LIN9Q5TKA1 542 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 PRSS55Q6UWB4 352 aaPredicted RBP12.44□□□□□ -0.42
BEST3-209ENST00000548658 HFE2Q6ZVN8 426 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
BEST3-209ENST00000548658 SMG7Q92540 1137 aaKnown RBP12.44□□□□□ -0.42
BEST3-209ENST00000548658 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 SNX27Q96L92 541 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 PRRX2Q99811 253 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 CLSTN3Q9BQT9 956 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 PRKD2Q9BZL6 878 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 CXCL16Q9H2A7 254 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 WDR6Q9NNW5 1121 aaKnown RBP12.44□□□□□ -0.42
BEST3-209ENST00000548658 CACNG4Q9UBN1 327 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 LIMD1Q9UGP4 676 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
BEST3-209ENST00000548658 NPHP3-ACAD11A0A0J9YXS1 232 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 K7ENM7 598 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 PODXLO00592 558 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 SYN3O14994 580 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 XPOTO43592 962 aaKnown RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 ZMYND10O75800 440 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 HNRNPA1P09651 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
BEST3-209ENST00000548658 SPATA31D3P0C874 917 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 HARSP12081 509 aaKnown RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 RPL17P18621 184 aaKnown RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 MARCKSP29966 332 aaPredicted RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 PLA2G5P39877 138 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 GRIN1Q05586 938 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 RAB33AQ14088 237 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 SLC39A14Q15043 492 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 CCDC73Q6ZRK6 1079 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 SPATA31D4Q6ZUB0 917 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 GLYCTKQ8IVS8 523 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 ZBTB45Q96K62 511 aaPredicted RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.43□□□□□ -0.42
BEST3-209ENST00000548658 IGSF9Q9P2J2 1179 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 RAPGEFL1Q9UHV5 662 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
BEST3-209ENST00000548658 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 NUB1Q9Y5A7 615 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
BEST3-209ENST00000548658 RFPL2O75678 378 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 PIGRP01833 764 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 HOXA9P31269 272 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 NUBP1P53384 320 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 GTF2BQ00403 316 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
BEST3-209ENST00000548658 SLC10A6Q3KNW5 377 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 PPM1LQ5SGD2 360 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 SLFN12LQ6IEE8 588 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 SV2BQ7L1I2 683 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 CD302Q8IX05 232 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
BEST3-209ENST00000548658 ZMAT2Q96NC0 199 aaKnown RBP12.42□□□□□ -0.42
BEST3-209ENST00000548658 ST6GALNAC4Q9H4F1 302 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 MTRRQ9UBK8 725 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 FBXW11Q9UKB1 542 aa12.42□□□□□ -0.42
BEST3-209ENST00000548658 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms