RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 PARM1Q6UWI2 310 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 FGF14Q92915 247 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 DRC1Q96MC2 740 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 TCHPQ9BT92 498 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 MRPL4Q9BYD3 311 aaKnown RBP25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 C17orf75Q9HAS0 396 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 CDY1Q9Y6F8 540 aa25.33■■□□□ 1.65
SMARCD1-204ENST00000547637 DOCK6Q96HP0 2047 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 DCNP07585 359 aaKnown RBP25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 GRM5P41594 1212 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 PEX3P56589 373 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 STARD6P59095 220 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 NTHL1P78549 312 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 PRKCQQ04759 706 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 ST3GAL1Q11201 340 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 UPP1Q16831 310 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 ZNF568Q3ZCX4 644 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 C1orf210Q8IVY1 113 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 POLD4Q9HCU8 107 aa25.32■■□□□ 1.64
SMARCD1-204ENST00000547637 SMIM28A0A1B0GU29 152 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 ADAM12O43184 909 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 BORCS6Q96GS4 357 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 ACAP3Q96P50 834 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 BCO2Q9BYV7 579 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 CXCL16Q9H2A7 254 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 KMT5AQ9NQR1 393 aa25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 MRPS23Q9Y3D9 190 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-204ENST00000547637 KANSL1LA0AUZ9 987 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 LRG1P02750 347 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 PTGDRQ13258 359 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 ECM1Q16610 540 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 RSPO2Q6UXX9 243 aaPredicted RBP25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 PJA1Q8NG27 643 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 ZNF461Q8TAF7 563 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 ACO2Q99798 780 aaKnown RBP25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 RPP25Q9BUL9 199 aaKnown RBP25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 TIPINQ9BVW5 301 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 KIF3AQ9Y496 699 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 NUB1Q9Y5A7 615 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 TRIP11Q15643 1979 aa25.3■■□□□ 1.64
SMARCD1-204ENST00000547637 H7C4K7 107 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 EDN1P05305 212 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 PTPN2P17706 415 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 TKTP29401 623 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 RPL9P32969 192 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 ID4P47928 161 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 NPTX2P47972 431 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 OSTNP61366 133 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 SNW1Q13573 536 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 MLF2Q15773 248 aaPredicted RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 SLC44A4Q53GD3 710 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 DTHD1Q6ZMT9 781 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 C4orf32Q8N8J7 132 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 IGSF22Q8N9C0 903 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 ST13P5Q8NFI4 369 aaPredicted RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 ITFG1Q8TB96 612 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 GDE1Q9NZC3 331 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 DNMT3BQ9UBC3 853 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 VWA8A3KMH1 1905 aa25.29■■□□□ 1.64
SMARCD1-204ENST00000547637 PRRG1O14668 218 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 NCAM2O15394 837 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 HIP1RO75146 1068 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 MCF2P10911 925 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 MAGEA9P43362 315 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 STRN3Q13033 797 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 ERMP1Q7Z2K6 904 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 NELL2Q99435 816 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 OSBPL6Q9BZF3 934 aa25.28■■□□□ 1.64
SMARCD1-204ENST00000547637 PODXLO00592 558 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 SYN3O14994 580 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 U2AF2P26368 475 aaKnown RBP eCLIP25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 BRCC3P46736 316 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 SMTNP53814 917 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 XKR4Q5GH76 650 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 SLC8B1Q6J4K2 584 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 ALKAL1Q6UXT8 129 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 ELMOD1Q8N336 334 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 KCTD17Q8N5Z5 321 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 HINFPQ9BQA5 517 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 FOXQ1Q9C009 403 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 CDT1Q9H211 546 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 GOLGA2P5Q9HBQ8 144 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 DLGAP2Q9P1A6 1054 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 MYH15Q9Y2K3 1946 aa25.27■■□□□ 1.64
SMARCD1-204ENST00000547637 E9PMD0 336 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 ZNF197O14709 1029 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 RHOP08100 348 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 SP9P0CG40 484 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 PRPHP41219 470 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 UBXN2BQ14CS0 331 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 MPZL3Q6UWV2 235 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 NPAS3Q8IXF0 933 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 TARS2Q9BW92 718 aaKnown RBP25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 PTPRHQ9HD43 1115 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 HCFC1R1Q9NWW0 138 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 ARHGAP28Q9P2N2 729 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 MRPS17Q9Y2R5 130 aaKnown RBP25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 R4GN57 208 aa25.26■■□□□ 1.63
SMARCD1-204ENST00000547637 LAMTOR5O43504 91 aa25.25■■□□□ 1.63
SMARCD1-204ENST00000547637 ECI2O75521 394 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms