RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 BMP8AQ7Z5Y6 402 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 ZDHHC14Q8IZN3 488 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 HDAC7Q8WUI4 952 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 PIK3R5Q8WYR1 880 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
BEST3-208ENST00000547208 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 HAPLN2Q9GZV7 340 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
BEST3-208ENST00000547208 ODF2LQ9ULJ1 636 aa11.3□□□□□ -0.6
BEST3-208ENST00000547208 CCDC195A0A1B0GUA6 201 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 ADAM12O43184 909 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
BEST3-208ENST00000547208 TOM1L1O75674 476 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 MYBP10242 640 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 KCNE1P15382 129 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 FGFR3P22607 806 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 CREMQ03060 361 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 TCF15Q12870 199 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 MCM6Q14566 821 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 TDRD5Q8NAT2 981 aaKnown RBP11.29□□□□□ -0.6
BEST3-208ENST00000547208 RAD54LQ92698 747 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
BEST3-208ENST00000547208 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
BEST3-208ENST00000547208 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 SPTBN4Q9H254 2564 aa11.29□□□□□ -0.6
BEST3-208ENST00000547208 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 ZFHX2Q9C0A1 2572 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 SCN1AP35498 2009 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 PTPRZ1P23471 2315 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 FAM189A1O60320 539 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 B3GAT3O94766 335 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 ASGR2P07307 311 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 SMTNP53814 917 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 MCL1Q07820 350 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 STRN3Q13033 797 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.6
BEST3-208ENST00000547208 PSMD5Q16401 504 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 SLC10A6Q3KNW5 377 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 DCLRE1AQ6PJP8 1040 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 UROC1Q96N76 676 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 TCHPQ9BT92 498 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 PLEKHA4Q9H4M7 779 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 WDR6Q9NNW5 1121 aaKnown RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 KCNG1Q9UIX4 513 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 FBXW11Q9UKB1 542 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
BEST3-208ENST00000547208 SRPRBQ9Y5M8 271 aaKnown RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
BEST3-208ENST00000547208 I3L4J1 428 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 ZMYND10O75800 440 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 PIGRP01833 764 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 TKTP29401 623 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 DDIT3P35638 169 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 BRCC3P46736 316 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 ELAVL2Q12926 359 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 CEP57Q86XR8 500 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 TMEM130Q8N3G9 435 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 PBXIP1Q96AQ6 731 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
BEST3-208ENST00000547208 MFSD14AQ96MC6 490 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 CLIC6Q96NY7 704 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms