RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DACH2Q96NX9 599 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 MAGEB5Q9BZ81 275 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 KLHL4Q9C0H6 718 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 GJB4Q9NTQ9 266 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 DMGDHQ9UI17 866 aaKnown RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 TNFAIP8O95379 198 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 NSMFQ6X4W1 530 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 SLC35G2Q8TBE7 412 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 MAP3K14Q99558 947 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 FRMPD2Q68DX3 1309 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 PSMC3P17980 439 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 CASP1P29466 404 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 VAMP7P51809 220 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 MFSD14BQ5SR56 506 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 CCDC90BQ9GZT6 254 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 WDR35Q9P2L0 1181 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 H3BRJ5 948 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 WFS1O76024 890 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 APOA4P06727 396 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 PDHBP11177 359 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 C4BPBP20851 252 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 ROR1Q01973 937 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 MRPL28Q13084 256 aaKnown RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 TAB3Q8N5C8 712 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-212ENST00000546744 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 VPS11Q9H270 941 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 KCND2Q9NZV8 630 aa13.48□□□□□ -0.25
PTCH1-212ENST00000546744 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TM9SF1O15321 606 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 KLRC1P26715 233 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 IFNA8P32881 189 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 CASP2P42575 452 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 PLD3Q8IV08 490 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 FBXL16Q8N461 479 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 PIK3R5Q8WYR1 880 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 APEX2Q9UBZ4 518 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 LZTS1Q9Y250 596 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TLR3O15455 904 aaKnown RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 ATP9AO75110 1047 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 BTDP43251 543 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 STX5Q13190 355 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 SNX30Q5VWJ9 437 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 LVRNQ6Q4G3 990 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 LRRC47Q8N1G4 583 aaKnown RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TTC8Q8TAM2 541 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 ZNF398Q8TD17 642 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 E2F7Q96AV8 911 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 MAGED4Q96JG8 741 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 CNGB3Q9NQW8 809 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TRIM10Q9UDY6 481 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 COILP38432 576 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-212ENST00000546744 GYG1P46976 350 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 SIX6OS1Q8N1H7 587 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TATDN2Q93075 761 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 PPP1R14BQ96C90 147 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TEX12Q9BXU0 123 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
PTCH1-212ENST00000546744 H2AFYO75367 372 aaKnown RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 SUPT3HO75486 399 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 TAF12Q16514 161 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 LRRC8EQ6NSJ5 796 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 TEKT2Q9UIF3 430 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 TMCO1Q9UM00 188 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 G3BP2Q9UN86 482 aaKnown RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 GOLGA8TH3BQL2 631 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 AP5Z1O43299 807 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 ARL13BQ3SXY8 428 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms