RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 CYP4A22Q5TCH4 519 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 ENOSF1Q7L5Y1 443 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
CUX1-211ENST00000546411 SPIRE2Q8WWL2 714 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 CCDC160A6NGH7 325 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 MAP3K6O95382 1288 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 CALB1P05937 261 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 C15orf52Q6ZUT6 534 aaKnown RBP16.64■□□□□ 0.25
CUX1-211ENST00000546411 ATL2Q8NHH9 583 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 IL31RAQ8NI17 732 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 HVCN1Q96D96 273 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 RNF181Q9P0P0 153 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 CIB2O75838 187 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 AMPD2Q01433 879 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 C1orf228Q6PIY5 440 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.251e-11■■■■□ 21.9
CUX1-211ENST00000546411 PARVAQ9NVD7 372 aa16.64■□□□□ 0.25
CUX1-211ENST00000546411 TCP11X1B4DZS4 312 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 KRT3P12035 628 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 KRT10P13645 584 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 BRD2P25440 801 aaKnown RBP16.63■□□□□ 0.25
CUX1-211ENST00000546411 GTF2H1P32780 548 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 RASSF2P50749 326 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
CUX1-211ENST00000546411 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
CUX1-211ENST00000546411 CYFIP2Q96F07 1278 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 MAP2K7O14733 419 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 ANXA13P27216 316 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 ERFP50548 548 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 MAPK7Q13164 816 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 SLC13A5Q86YT5 568 aaPredicted RBP16.63■□□□□ 0.25
CUX1-211ENST00000546411 C4orf33Q8N1A6 199 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 ZSWIM1Q9BR11 485 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 CYP26B1Q9NR63 512 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 IP6K2Q9UHH9 426 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 BAG2O95816 211 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 ABCD1P33897 745 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 CDH6P55285 790 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 PPP3CAQ08209 521 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 PSMD6Q15008 389 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 SURF1Q15526 300 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 TAF12Q16514 161 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 SEPT1Q8WYJ6 367 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 LRRC4Q9HBW1 653 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
CUX1-211ENST00000546411 MEFVO15553 781 aaPredicted RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 FDX1P10109 184 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 FAM167AQ96KS9 214 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 TGS1Q96RS0 853 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 KLF6Q99612 283 aaPredicted RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 SALL4Q9UJQ4 1053 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 G3BP2Q9UN86 482 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 CHD2O14647 1828 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 PGK2P07205 417 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 PPM1NQ8N819 430 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 RPS6KC1Q96S38 1066 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 AGO4Q9HCK5 861 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 GTF3C4Q9UKN8 822 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 INTUQ9ULD6 942 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 H0Y3Z8 333 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 MKL1Q969V6 931 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 PRDM4Q9UKN5 801 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 AGAP1Q9UPQ3 857 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 ASTN1O14525 1302 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 SLC26A4O43511 780 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 TLR2O60603 784 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 ARL4AP40617 200 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 ITGA8P53708 1063 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 CFAP61Q8NHU2 1237 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 EPS8L3Q8TE67 593 aaKnown RBP16.62■□□□□ 0.25
CUX1-211ENST00000546411 MAML1Q92585 1016 aa16.62■□□□□ 0.25
CUX1-211ENST00000546411 CAND2O75155 1236 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
CUX1-211ENST00000546411 COILP38432 576 aaPredicted RBP16.61■□□□□ 0.25
CUX1-211ENST00000546411 PHKA2P46019 1235 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 ARL4CP56559 192 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 KCNT1Q5JUK3 1230 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 KRT35Q92764 455 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 RGL2O15211 777 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 BACE1P56817 501 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 ITKQ08881 620 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 KCTD10Q9H3F6 313 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 NDC80O14777 642 aa16.61■□□□□ 0.25
CUX1-211ENST00000546411 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■□□□ 12.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms