RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 RDH13Q8NBN7 331 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 C18orf25Q96B23 403 aaPredicted RBP22.58■■□□□ 1.2
SCARB1-211ENST00000546215 TSPAN18Q96SJ8 248 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 SLC38A7Q9NVC3 462 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 CACNG4Q9UBN1 327 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 CARNS1A5YM72 827 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 H3BNC9 293 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 RFXAPO00287 272 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 PSMA7O14818 248 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 EXOC3O60645 756 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 IL18RAPO95256 599 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 CCNE1P24864 410 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 KLHL40Q2TBA0 621 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 ANKRD40Q6AI12 368 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 JADE1Q6IE81 842 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 TMEM173Q86WV6 379 aaPredicted RBP22.57■■□□□ 1.2
SCARB1-211ENST00000546215 KIF12Q96FN5 646 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 PAAF1Q9BRP4 392 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 C11orf84Q9BUA3 381 aaPredicted RBP22.57■■□□□ 1.2
SCARB1-211ENST00000546215 PRDM12Q9H4Q4 367 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 SPG21Q9NZD8 308 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 FAN1Q9Y2M0 1017 aa22.57■■□□□ 1.2
SCARB1-211ENST00000546215 CASTOR2A6NHX0 329 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 ITGB1P05556 798 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 NR2F2P24468 414 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 OR1G1P47890 313 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 KLHL10Q6JEL2 608 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 GOLGA2P5Q9HBQ8 144 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 DERAQ9Y315 318 aa22.56■■□□□ 1.2
SCARB1-211ENST00000546215 TRIM49BA6NDI0 452 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 LPXNO60711 386 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 FGF18O76093 207 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 NFICP08651 508 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 PPM1AP35813 382 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 CASP4P49662 377 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 PLCB3Q01970 1234 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 GPM6BQ13491 265 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 GDPD5Q8WTR4 605 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 BCL7CQ8WUZ0 217 aaPredicted RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 RABGGTAQ92696 567 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 IGSF21Q96ID5 467 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 PDE11AQ9HCR9 933 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 ALG13Q9NP73 1137 aaKnown RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 TUBGCP4Q9UGJ1 667 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 PRG3Q9Y2Y8 225 aaPredicted RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 C2CD2Q9Y426 696 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 RPL13P26373 211 aaKnown RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 LRRC63Q05C16 580 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 CYP24A1Q07973 514 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 ADAM9Q13443 819 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 HSP90AA2PQ14568 343 aaPredicted RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 TMEM132DQ14C87 1099 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 CAVIN1Q6NZI2 390 aaKnown RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 EFCAB13Q8IY85 973 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 MLKLQ8NB16 471 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 SPPL3Q8TCT6 385 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 NELFBQ8WX92 580 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 MFSD14AQ96MC6 490 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 TSG101Q99816 390 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 MARCH5Q9NX47 278 aa22.55■■□□□ 1.2
SCARB1-211ENST00000546215 UBQLN1Q9UMX0 589 aaKnown RBP22.55■■□□□ 1.2
SCARB1-211ENST00000546215 F8W810 466 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 CYP3A5P20815 502 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 CLCNKBP51801 687 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 NLRP12P59046 1061 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 UPP1Q16831 310 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 SPATA1Q5VX52 437 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 TTI2Q6NXR4 508 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 ZC3H3Q8IXZ2 948 aaKnown RBP22.54■■□□□ 1.2
SCARB1-211ENST00000546215 TMEM130Q8N3G9 435 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 UROC1Q96N76 676 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 MTMR10Q9NXD2 777 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 CTNND2Q9UQB3 1225 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 PLXNA4Q9HCM2 1894 aa22.54■■□□□ 1.2
SCARB1-211ENST00000546215 GRM6O15303 877 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 AKAP3O75969 853 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 PAK1Q13153 545 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 SURF1Q15526 300 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 DPCR1Q3MIW9 517 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 CEP135Q66GS9 1140 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 FOXR2Q6PJQ5 311 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 NT5DC4Q86YG4 428 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 EEF2KMTQ96G04 330 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 TMEM169Q96HH4 297 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 GUCD1Q96NT3 240 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 COLEC11Q9BWP8 271 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 GZF1Q9H116 711 aaPredicted RBP22.53■■□□□ 1.2
SCARB1-211ENST00000546215 FRMD4BQ9Y2L6 1034 aa22.53■■□□□ 1.2
SCARB1-211ENST00000546215 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.53■■□□□ 1.2
SCARB1-211ENST00000546215 MAPK13O15264 365 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 XPOTO43592 962 aaKnown RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 IGFBP6P24592 240 aaPredicted RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 DNAJB1P25685 340 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 GUCY2FP51841 1108 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 FKBP3Q00688 224 aaKnown RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 KRT17Q04695 432 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 CAMK1Q14012 370 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 PSMD6Q15008 389 aa22.52■■□□□ 1.2
SCARB1-211ENST00000546215 DDX27Q96GQ7 796 aaKnown RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 CDX2Q99626 313 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms